RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DHX36Q9H2U1 1008 aaKnown RBP19.62■□□□□ 0.73
TPM1-219ENST00000559397 PPP2R3BQ9Y5P8 575 aa19.62■□□□□ 0.73
TPM1-219ENST00000559397 LAMA4Q16363 1823 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
TPM1-219ENST00000559397 DDIT3P35638 169 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 KRT26Q7Z3Y9 468 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 SULF1Q8IWU6 871 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 ZNF784Q8NCA9 323 aaPredicted RBP19.61■□□□□ 0.73
TPM1-219ENST00000559397 TTC14Q96N46 770 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 UPF3BQ9BZI7 483 aaKnown RBP19.61■□□□□ 0.73
TPM1-219ENST00000559397 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 CTNNA3Q9UI47 895 aa19.61■□□□□ 0.73
TPM1-219ENST00000559397 SLC4A8Q2Y0W8 1093 aa19.6■□□□□ 0.73
TPM1-219ENST00000559397 MAP1SQ66K74 1059 aaPredicted RBP19.6■□□□□ 0.73
TPM1-219ENST00000559397 USP48Q86UV5 1035 aa19.6■□□□□ 0.73
TPM1-219ENST00000559397 SLKQ9H2G2 1235 aaPredicted RBP19.6■□□□□ 0.73
TPM1-219ENST00000559397 MINDY4BA8MYZ0 360 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 DLK2Q6UY11 383 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 CDC37L1Q7L3B6 337 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 TTC6Q86TZ1 520 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 ZSCAN29Q8IWY8 852 aaPredicted RBP19.59■□□□□ 0.73
TPM1-219ENST00000559397 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
TPM1-219ENST00000559397 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 PPARAQ07869 468 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 NBPF12Q5TAG4 269 aaPredicted RBP19.59■□□□□ 0.73
TPM1-219ENST00000559397 PRAMEF18Q5VWM3 479 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
TPM1-219ENST00000559397 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
TPM1-219ENST00000559397 CSRNP1Q96S65 589 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 PI4KBQ9UBF8 816 aa19.59■□□□□ 0.73
TPM1-219ENST00000559397 ROBO3Q96MS0 1386 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 ZNF213O14771 459 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 HLA-DOAP06340 250 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 CYP21A2P08686 494 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 HAND2P61296 217 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 GABPAQ06546 454 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 IMMTQ16891 758 aaKnown RBP19.58■□□□□ 0.72
TPM1-219ENST00000559397 AMOTL1Q8IY63 956 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 SPRYD3Q8NCJ5 442 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 NBPF3Q9H094 633 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 EHD4Q9H223 541 aa19.58■□□□□ 0.72
TPM1-219ENST00000559397 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
TPM1-219ENST00000559397 CASTP20810 708 aaKnown RBP19.57■□□□□ 0.72
TPM1-219ENST00000559397 PSMA5P28066 241 aa19.57■□□□□ 0.72
TPM1-219ENST00000559397 KRT32Q14532 448 aa19.57■□□□□ 0.72
TPM1-219ENST00000559397 CHADLQ6NUI6 762 aa19.57■□□□□ 0.72
TPM1-219ENST00000559397 TAF6LQ9Y6J9 622 aa19.57■□□□□ 0.72
TPM1-219ENST00000559397 MAP3K10Q02779 954 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 CTDSPL2Q05D32 466 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 FOXP4Q8IVH2 680 aaPredicted RBP19.56■□□□□ 0.72
TPM1-219ENST00000559397 DYNLL2Q96FJ2 89 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 TACC3Q9Y6A5 838 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 SSC5DA1L4H1 1573 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 RUFY3Q7L099 469 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 TBC1D10CQ8IV04 446 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 CDCA5Q96FF9 252 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 TMX3Q96JJ7 454 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 DNAJC18Q9H819 358 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 CHMP5Q9NZZ3 219 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 SERPINB13Q9UIV8 391 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
TPM1-219ENST00000559397 TBC1D12O60347 775 aa19.55■□□□□ 0.72
TPM1-219ENST00000559397 CUL4AQ13619 759 aa19.55■□□□□ 0.72
TPM1-219ENST00000559397 C16orf86Q6ZW13 317 aa19.55■□□□□ 0.72
TPM1-219ENST00000559397 CIZ1Q9ULV3 898 aaPredicted RBP19.55■□□□□ 0.72
TPM1-219ENST00000559397 TRAF5O00463 557 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 ITGBL1O95965 494 aaPredicted RBP19.54■□□□□ 0.72
TPM1-219ENST00000559397 FGRP09769 529 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 SUPT20HL1Q3ZLR7 823 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 STAG1Q8WVM7 1258 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 ALDH8A1Q9H2A2 487 aaPredicted RBP19.54■□□□□ 0.72
TPM1-219ENST00000559397 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 HERC5Q9UII4 1024 aaKnown RBP19.54■□□□□ 0.72
TPM1-219ENST00000559397 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
TPM1-219ENST00000559397 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
TPM1-219ENST00000559397 CPA1P15085 419 aa19.53■□□□□ 0.72
TPM1-219ENST00000559397 AK2P54819 239 aa19.53■□□□□ 0.72
TPM1-219ENST00000559397 MIGA2Q7L4E1 593 aa19.53■□□□□ 0.72
TPM1-219ENST00000559397 SLC44A5Q8NCS7 719 aa19.53■□□□□ 0.72
TPM1-219ENST00000559397 SWAP70Q9UH65 585 aa19.53■□□□□ 0.72
TPM1-219ENST00000559397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.53■□□□□ 0.72
TPM1-219ENST00000559397 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
TPM1-219ENST00000559397 SLC3A2P08195 630 aaKnown RBP19.52■□□□□ 0.72
TPM1-219ENST00000559397 CDK8P49336 464 aa19.52■□□□□ 0.72
TPM1-219ENST00000559397 FMR1Q06787 632 aaKnown RBP eCLIP19.52■□□□□ 0.72
TPM1-219ENST00000559397 AKNAD1Q5T1N1 836 aa19.52■□□□□ 0.72
TPM1-219ENST00000559397 STOX1Q6ZVD7 989 aa19.52■□□□□ 0.72
TPM1-219ENST00000559397 HOOK2Q96ED9 719 aa19.52■□□□□ 0.72
TPM1-219ENST00000559397 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.72
TPM1-219ENST00000559397 E7EWF7 191 aa19.52■□□□□ 0.71
TPM1-219ENST00000559397 TOMM70O94826 608 aa19.52■□□□□ 0.71
TPM1-219ENST00000559397 RPS6KB1P23443 525 aa19.52■□□□□ 0.71
TPM1-219ENST00000559397 SHMT1P34896 483 aa19.52■□□□□ 0.71
TPM1-219ENST00000559397 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.71
TPM1-219ENST00000559397 BLOC1S2Q6QNY1 142 aa19.52■□□□□ 0.71
TPM1-219ENST00000559397 CRACR2BQ8N4Y2 399 aaPredicted RBP19.52■□□□□ 0.71
TPM1-219ENST00000559397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms