RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 ZAP70P43403 619 aa25.16■■□□□ 1.62
TSPAN3-206ENST00000559373 NAA16Q6N069 864 aaPredicted RBP25.16■■□□□ 1.62
TSPAN3-206ENST00000559373 PRRT2Q7Z6L0 340 aaPredicted RBP25.16■■□□□ 1.62
TSPAN3-206ENST00000559373 GPR108Q9NPR9 543 aa25.16■■□□□ 1.62
TSPAN3-206ENST00000559373 PARK7Q99497 189 aaKnown RBP25.15■■□□□ 1.62
TSPAN3-206ENST00000559373 BCL11AQ9H165 835 aa25.15■■□□□ 1.62
TSPAN3-206ENST00000559373 PIH1D3Q9NQM4 214 aaKnown RBP25.15■■□□□ 1.62
TSPAN3-206ENST00000559373 DBNLQ9UJU6 430 aaKnown RBP25.15■■□□□ 1.62
TSPAN3-206ENST00000559373 FASTKD5Q7L8L6 764 aaKnown RBP25.14■■□□□ 1.62
TSPAN3-206ENST00000559373 TGFBRAP1Q8WUH2 860 aa25.14■■□□□ 1.62
TSPAN3-206ENST00000559373 EAF2Q96CJ1 260 aaPredicted RBP25.14■■□□□ 1.62
TSPAN3-206ENST00000559373 NOL10Q9BSC4 688 aaKnown RBP25.14■■□□□ 1.62
TSPAN3-206ENST00000559373 EXOC6BQ9Y2D4 811 aa25.14■■□□□ 1.62
TSPAN3-206ENST00000559373 MTFR1Q15390 333 aa25.13■■□□□ 1.61
TSPAN3-206ENST00000559373 CEP85Q6P2H3 762 aa25.13■■□□□ 1.61
TSPAN3-206ENST00000559373 MAPKAPK5Q8IW41 473 aa25.13■■□□□ 1.61
TSPAN3-206ENST00000559373 MYPNQ86TC9 1320 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 TBC1D12O60347 775 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 BCRP11274 1271 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 DYNLL1P63167 89 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 TREML2Q5T2D2 321 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 SRRDQ9UH36 339 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 GABRQQ9UN88 632 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 NOP58Q9Y2X3 529 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 ZBED9Q6R2W3 1325 aa25.12■■□□□ 1.61
TSPAN3-206ENST00000559373 NPM3O75607 178 aaKnown RBP25.11■■□□□ 1.61
TSPAN3-206ENST00000559373 SPP2Q13103 211 aa25.11■■□□□ 1.61
TSPAN3-206ENST00000559373 SHROOM1Q2M3G4 852 aaPredicted RBP25.11■■□□□ 1.61
TSPAN3-206ENST00000559373 RAET1EQ8TD07 263 aa25.11■■□□□ 1.61
TSPAN3-206ENST00000559373 SAP30BPQ9UHR5 308 aaKnown RBP25.11■■□□□ 1.61
TSPAN3-206ENST00000559373 GNRH1P01148 92 aa25.1■■□□□ 1.61
TSPAN3-206ENST00000559373 PRKCZQ05513 592 aa25.1■■□□□ 1.61
TSPAN3-206ENST00000559373 COL2A1P02458 1487 aaPredicted RBP25.09■■□□□ 1.61
TSPAN3-206ENST00000559373 APBB1O00213 710 aa25.09■■□□□ 1.61
TSPAN3-206ENST00000559373 BAG3O95817 575 aa25.09■■□□□ 1.61
TSPAN3-206ENST00000559373 SMCR8Q8TEV9 937 aaPredicted RBP25.09■■□□□ 1.61
TSPAN3-206ENST00000559373 PALD1Q9ULE6 856 aa25.09■■□□□ 1.61
TSPAN3-206ENST00000559373 CEP290O15078 2479 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 IDH1O75874 414 aaKnown RBP25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 CYP7A1P22680 504 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 CAP2P40123 477 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 HMGCS2P54868 508 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 FCGRTP55899 365 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 JAG1P78504 1218 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 ANKRD13CQ8N6S4 541 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 MIGA1Q8NAN2 632 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 ANTXR1Q9H6X2 564 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 IL1RAPL2Q9NP60 686 aa25.08■■□□□ 1.61
TSPAN3-206ENST00000559373 FLT1P17948 1338 aa25.08■■□□□ 1.6
TSPAN3-206ENST00000559373 MAP4K4O95819 1239 aaPredicted RBP25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 HOXD10P28358 340 aa25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 GRK4P32298 578 aa25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 PRMT2P55345 433 aa25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 PI4KBQ9UBF8 816 aa25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 BIN2Q9UBW5 565 aaPredicted RBP25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 AGTPBP1Q9UPW5 1226 aa25.07■■□□□ 1.6
TSPAN3-206ENST00000559373 MYH8P13535 1937 aa25.06■■□□□ 1.6
TSPAN3-206ENST00000559373 PPP4CP60510 307 aa25.06■■□□□ 1.6
TSPAN3-206ENST00000559373 AACSQ86V21 672 aa25.06■■□□□ 1.6
TSPAN3-206ENST00000559373 ZNF280CQ8ND82 737 aa25.06■■□□□ 1.6
TSPAN3-206ENST00000559373 NAV1Q8NEY1 1877 aa25.06■■□□□ 1.6
TSPAN3-206ENST00000559373 PLXNB2O15031 1838 aa25.05■■□□□ 1.6
TSPAN3-206ENST00000559373 GDF11O95390 407 aa25.05■■□□□ 1.6
TSPAN3-206ENST00000559373 PLCG2P16885 1265 aa25.05■■□□□ 1.6
TSPAN3-206ENST00000559373 MAGEB6Q8N7X4 407 aa25.05■■□□□ 1.6
TSPAN3-206ENST00000559373 ZNF512BQ96KM6 892 aaPredicted RBP25.05■■□□□ 1.6
TSPAN3-206ENST00000559373 DNAJC18Q9H819 358 aa25.05■■□□□ 1.6
TSPAN3-206ENST00000559373 MYH7P12883 1935 aa25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 USP17L5A8MUK1 530 aa25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 CRACR2BQ8N4Y2 399 aaPredicted RBP25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 HERC5Q9UII4 1024 aaKnown RBP25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 TAOK2Q9UL54 1235 aa25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 COG6Q9Y2V7 657 aa25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 SLC45A1Q9Y2W3 748 aa25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 BAZ2AQ9UIF9 1905 aaKnown RBP25.04■■□□□ 1.6
TSPAN3-206ENST00000559373 CCL5P13501 91 aa25.03■■□□□ 1.6
TSPAN3-206ENST00000559373 ELNP15502 786 aa25.03■■□□□ 1.6
TSPAN3-206ENST00000559373 DHX36Q9H2U1 1008 aaKnown RBP25.03■■□□□ 1.6
TSPAN3-206ENST00000559373 PEX10O60683 326 aa25.02■■□□□ 1.6
TSPAN3-206ENST00000559373 FLT3LGP49771 235 aa25.02■■□□□ 1.6
TSPAN3-206ENST00000559373 SHISA4Q96DD7 197 aa25.02■■□□□ 1.6
TSPAN3-206ENST00000559373 TRIM34Q9BYJ4 488 aa25.02■■□□□ 1.6
TSPAN3-206ENST00000559373 TNPO2O14787 897 aaKnown RBP25.01■■□□□ 1.59
TSPAN3-206ENST00000559373 MTMR2Q13614 643 aa25.01■■□□□ 1.59
TSPAN3-206ENST00000559373 PROCA1Q8NCQ7 364 aaPredicted RBP25.01■■□□□ 1.59
TSPAN3-206ENST00000559373 ADCY3O60266 1144 aa25■■□□□ 1.59
TSPAN3-206ENST00000559373 USP5P45974 858 aa25■■□□□ 1.59
TSPAN3-206ENST00000559373 RHPN1Q8TCX5 695 aa25■■□□□ 1.59
TSPAN3-206ENST00000559373 RNF208Q9H0X6 261 aa25■■□□□ 1.59
TSPAN3-206ENST00000559373 ASCC2Q9H1I8 757 aaPredicted RBP25■■□□□ 1.59
TSPAN3-206ENST00000559373 ERC1Q8IUD2 1116 aa24.99■■□□□ 1.59
TSPAN3-206ENST00000559373 SIRT2Q8IXJ6 389 aa24.99■■□□□ 1.59
TSPAN3-206ENST00000559373 UNC93B1Q9H1C4 597 aa24.99■■□□□ 1.59
TSPAN3-206ENST00000559373 PNMA3Q9UL41 463 aa24.99■■□□□ 1.59
TSPAN3-206ENST00000559373 DDX60LQ5H9U9 1706 aaKnown RBP24.98■■□□□ 1.59
TSPAN3-206ENST00000559373 FOXP4Q8IVH2 680 aaPredicted RBP24.98■■□□□ 1.59
TSPAN3-206ENST00000559373 AS3MTQ9HBK9 375 aa24.98■■□□□ 1.59
TSPAN3-206ENST00000559373 ALPK3Q96L96 1907 aa24.97■■□□□ 1.59
TSPAN3-206ENST00000559373 SLAIN1Q8ND83 568 aa24.97■■□□□ 1.59
TSPAN3-206ENST00000559373 INHAP05111 366 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms