RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 NBPF3Q9H094 633 aa19.18■□□□□ 0.66
PBX1-215ENST00000559240 STAG1Q8WVM7 1258 aa19.18■□□□□ 0.66
PBX1-215ENST00000559240 ZBED3Q96IU2 234 aaPredicted RBP19.18■□□□□ 0.66
PBX1-215ENST00000559240 MTA3Q9BTC8 594 aa19.18■□□□□ 0.66
PBX1-215ENST00000559240 HDAC9Q9UKV0 1011 aa19.18■□□□□ 0.66
PBX1-215ENST00000559240 NOL7Q9UMY1 257 aaKnown RBP19.18■□□□□ 0.66
PBX1-215ENST00000559240 ZC3H4Q9UPT8 1303 aaKnown RBP19.17■□□□□ 0.66
PBX1-215ENST00000559240 MYH1P12882 1939 aa19.17■□□□□ 0.66
PBX1-215ENST00000559240 E7EWF7 191 aa19.17■□□□□ 0.66
PBX1-215ENST00000559240 ZNF280AP59817 542 aaPredicted RBP19.17■□□□□ 0.66
PBX1-215ENST00000559240 LOC102724159A0A0B4J2E5 919 aa19.17■□□□□ 0.66
PBX1-215ENST00000559240 YBX3P16989 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
PBX1-215ENST00000559240 PWP2Q15269 919 aaKnown RBP19.17■□□□□ 0.66
PBX1-215ENST00000559240 ADCK5Q3MIX3 580 aa19.17■□□□□ 0.66
PBX1-215ENST00000559240 STOX1Q6ZVD7 989 aa19.17■□□□□ 0.66
PBX1-215ENST00000559240 IDI2Q9BXS1 227 aa19.17■□□□□ 0.66
PBX1-215ENST00000559240 TDO2P48775 406 aa19.16■□□□□ 0.66
PBX1-215ENST00000559240 EIF6P56537 245 aaKnown RBP19.16■□□□□ 0.66
PBX1-215ENST00000559240 NEK1Q96PY6 1258 aa19.16■□□□□ 0.66
PBX1-215ENST00000559240 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
PBX1-215ENST00000559240 CTR9Q6PD62 1173 aa19.16■□□□□ 0.66
PBX1-215ENST00000559240 JAKMIP1Q96N16 626 aaKnown RBP19.16■□□□□ 0.66
PBX1-215ENST00000559240 CNNM2Q9H8M5 875 aa19.16■□□□□ 0.66
PBX1-215ENST00000559240 DDX11L8A8MPP1 907 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 RAD17O75943 681 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 RPS6KB1P23443 525 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 U2AF2P26368 475 aaKnown RBP eCLIP19.15■□□□□ 0.66
PBX1-215ENST00000559240 ARHGAP27Q6ZUM4 889 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 SDR42E1Q8WUS8 393 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 AGXT2Q9BYV1 514 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 RNF41Q9H4P4 317 aaPredicted RBP19.15■□□□□ 0.66
PBX1-215ENST00000559240 TAF6LQ9Y6J9 622 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 PPARAQ07869 468 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 CSPP1Q1MSJ5 1256 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 EXOSC10Q01780 885 aaKnown RBP19.15■□□□□ 0.66
PBX1-215ENST00000559240 FKBP1CQ5VVH2 108 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 BLOC1S2Q6QNY1 142 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
PBX1-215ENST00000559240 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
PBX1-215ENST00000559240 CASTP20810 708 aaKnown RBP19.14■□□□□ 0.65
PBX1-215ENST00000559240 CDC42EP5Q6NZY7 148 aa19.14■□□□□ 0.65
PBX1-215ENST00000559240 FLT1P17948 1338 aa19.14■□□□□ 0.65
PBX1-215ENST00000559240 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
PBX1-215ENST00000559240 AKNAD1Q5T1N1 836 aa19.14■□□□□ 0.65
PBX1-215ENST00000559240 MB21D2Q8IYB1 491 aaPredicted RBP19.14■□□□□ 0.65
PBX1-215ENST00000559240 CHMP5Q9NZZ3 219 aa19.14■□□□□ 0.65
PBX1-215ENST00000559240 NEK4P51957 841 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 C12orf60Q5U649 245 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 DHX32Q7L7V1 743 aaKnown RBP19.13■□□□□ 0.65
PBX1-215ENST00000559240 TBC1D10CQ8IV04 446 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 GRIN3BO60391 1043 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 USP5P45974 858 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 SCNN1DP51172 638 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 ANKRD1Q15327 319 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 KRT23Q9C075 422 aa19.13■□□□□ 0.65
PBX1-215ENST00000559240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.13■□□□□ 0.65
PBX1-215ENST00000559240 SPDYE2BA6NHP3 402 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 ORC4O43929 436 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 SPDYE6P0CI01 402 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 CFAP100Q494V2 611 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 HSCBQ8IWL3 235 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 GPC2Q8N158 579 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 OGFOD1Q8N543 542 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 F8W031 263 aaPredicted RBP19.12■□□□□ 0.65
PBX1-215ENST00000559240 MYRIPQ8NFW9 859 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 ATRNL1Q5VV63 1379 aa19.12■□□□□ 0.65
PBX1-215ENST00000559240 K7ELQ4 463 aaPredicted RBP19.11■□□□□ 0.65
PBX1-215ENST00000559240 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 ENTPD3O75355 529 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 SLC3A2P08195 630 aaKnown RBP19.11■□□□□ 0.65
PBX1-215ENST00000559240 AMOTL1Q8IY63 956 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 TGFBRAP1Q8WUH2 860 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 TIGD1Q96MW7 591 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 PDRG1Q9NUG6 133 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 USP17L12C9JPN9 530 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 USP17L21D6R901 530 aa19.11■□□□□ 0.65
PBX1-215ENST00000559240 ZNF541Q9H0D2 1346 aa19.1■□□□□ 0.65
PBX1-215ENST00000559240 EVCP57679 992 aa19.1■□□□□ 0.65
PBX1-215ENST00000559240 EHD4Q9H223 541 aa19.1■□□□□ 0.65
PBX1-215ENST00000559240 CD2BP2O95400 341 aaKnown RBP19.1■□□□□ 0.65
PBX1-215ENST00000559240 MFSD6Q6ZSS7 791 aa19.1■□□□□ 0.65
PBX1-215ENST00000559240 MCM5P33992 734 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 TRDNQ13061 729 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 SPDYE2Q495Y8 402 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 UPF3BQ9BZI7 483 aaKnown RBP19.09■□□□□ 0.65
PBX1-215ENST00000559240 OSBPL5Q9H0X9 879 aaPredicted RBP19.09■□□□□ 0.65
PBX1-215ENST00000559240 DHX36Q9H2U1 1008 aaKnown RBP19.09■□□□□ 0.65
PBX1-215ENST00000559240 MCM9Q9NXL9 1143 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 ZKSCAN5Q9Y2L8 839 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 HAND2P61296 217 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 ZSCAN31Q96LW9 406 aaPredicted RBP19.09■□□□□ 0.65
PBX1-215ENST00000559240 TACC3Q9Y6A5 838 aa19.09■□□□□ 0.65
PBX1-215ENST00000559240 DLGAP5Q15398 846 aa19.08■□□□□ 0.65
PBX1-215ENST00000559240 METTL16Q86W50 562 aaKnown RBP19.08■□□□□ 0.65
PBX1-215ENST00000559240 PDCL2Q8N4E4 241 aa19.08■□□□□ 0.65
PBX1-215ENST00000559240 ZBTB12Q9Y330 459 aaPredicted RBP19.08■□□□□ 0.65
PBX1-215ENST00000559240 NEDD4P46934 1319 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms