RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
SMAD3-208ENST00000558827 FBXO46Q6PJ61 603 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-208ENST00000558827 EFCC1Q9HA90 598 aa15.23■□□□□ 0.03
SMAD3-208ENST00000558827 LAMB1P07942 1786 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
SMAD3-208ENST00000558827 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-208ENST00000558827 CYP2C8P10632 490 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
SMAD3-208ENST00000558827 JAG1P78504 1218 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
SMAD3-208ENST00000558827 SLC9C2Q5TAH2 1124 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 GPAT2Q6NUI2 795 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-208ENST00000558827 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 LRRCC1Q9C099 1032 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 CDK5RAP2Q96SN8 1893 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 ZSWIM8A7E2V4 1837 aa15.22■□□□□ 0.03
SMAD3-208ENST00000558827 MAST2Q6P0Q8 1798 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 CXCL11O14625 94 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 TBC1D12O60347 775 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 TLR2O60603 784 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 GDF11O95390 407 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-208ENST00000558827 PDE6AP16499 860 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 SPP2Q13103 211 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 ANKRD23Q86SG2 305 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 PI4KBQ9UBF8 816 aa15.21■□□□□ 0.03
SMAD3-208ENST00000558827 ZNF532Q9HCE3 1301 aa15.2■□□□□ 0.02
SMAD3-208ENST00000558827 MAGEB6P1A0A0J9YX57 407 aa15.2■□□□□ 0.02
SMAD3-208ENST00000558827 CAP2P40123 477 aa15.2■□□□□ 0.02
SMAD3-208ENST00000558827 EVX2Q03828 476 aa15.2■□□□□ 0.02
SMAD3-208ENST00000558827 DNAJC18Q9H819 358 aa15.2■□□□□ 0.02
SMAD3-208ENST00000558827 PTPN22Q9Y2R2 807 aa15.2■□□□□ 0.02
SMAD3-208ENST00000558827 DOCK1Q14185 1865 aa15.19■□□□□ 0.02
SMAD3-208ENST00000558827 A0A0G2JLL6 359 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-208ENST00000558827 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-208ENST00000558827 PRRT2Q7Z6L0 340 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-208ENST00000558827 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
SMAD3-208ENST00000558827 SIPA1L1O43166 1804 aa15.19■□□□□ 0.02
SMAD3-208ENST00000558827 MYH1P12882 1939 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 HLA-DOAP06340 250 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 ATP5JP18859 108 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 CTGFP29279 349 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 HMGCS2P54868 508 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 MLLT1Q03111 559 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-208ENST00000558827 TREML2Q5T2D2 321 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 C17orf99Q6UX52 265 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 RIOK1Q9BRS2 568 aaKnown RBP15.18■□□□□ 0.02
SMAD3-208ENST00000558827 DHX36Q9H2U1 1008 aaKnown RBP15.18■□□□□ 0.02
SMAD3-208ENST00000558827 DCTPP1Q9H773 170 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 PTCH2Q9Y6C5 1203 aa15.18■□□□□ 0.02
SMAD3-208ENST00000558827 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 PRKAB2O43741 272 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 CYP2D6P10635 497 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 LACTBP83111 547 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-208ENST00000558827 KIF22Q14807 665 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 FASTKD5Q7L8L6 764 aaKnown RBP15.17■□□□□ 0.02
SMAD3-208ENST00000558827 FOXP4Q8IVH2 680 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-208ENST00000558827 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMAD3-208ENST00000558827 SDR42E1Q8WUS8 393 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 HERC5Q9UII4 1024 aaKnown RBP15.17■□□□□ 0.02
SMAD3-208ENST00000558827 ATAD5Q96QE3 1844 aa15.17■□□□□ 0.02
SMAD3-208ENST00000558827 TCRBV5S4A2TA0A5A2 114 aa15.16■□□□□ 0.02
SMAD3-208ENST00000558827 FMNL1O95466 1100 aaPredicted RBP15.16■□□□□ 0.02
SMAD3-208ENST00000558827 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
SMAD3-208ENST00000558827 PSMC4P43686 418 aa15.16■□□□□ 0.02
SMAD3-208ENST00000558827 PLCD1P51178 756 aa15.16■□□□□ 0.02
SMAD3-208ENST00000558827 OTUD7AQ8TE49 926 aaPredicted RBP15.16■□□□□ 0.02
SMAD3-208ENST00000558827 PARK7Q99497 189 aaKnown RBP15.16■□□□□ 0.02
SMAD3-208ENST00000558827 HAUS7Q99871 368 aa15.16■□□□□ 0.02
SMAD3-208ENST00000558827 ZCCHC17Q9NP64 241 aaKnown RBP15.16■□□□□ 0.02
SMAD3-208ENST00000558827 FOCADQ5VW36 1801 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
SMAD3-208ENST00000558827 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
SMAD3-208ENST00000558827 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 PEX10O60683 326 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 MBD4O95243 580 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 GH2P01242 217 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 RGS19P49795 217 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 MTMR2Q13614 643 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 TRIM47Q96LD4 638 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
SMAD3-208ENST00000558827 MCM9Q9NXL9 1143 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 PTPRFP10586 1907 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
SMAD3-208ENST00000558827 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
SMAD3-208ENST00000558827 ADD2P35612 726 aa15.14■□□□□ 0.01
SMAD3-208ENST00000558827 ZYXQ15942 572 aaKnown RBP15.14■□□□□ 0.01
SMAD3-208ENST00000558827 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-208ENST00000558827 ECHDC1Q9NTX5 307 aa15.14■□□□□ 0.01
SMAD3-208ENST00000558827 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms