RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FAM196BA6NMK8 535 aa25.35■■□□□ 1.65
CASC4-204ENST00000557945 ARMC9Q7Z3E5 817 aa25.35■■□□□ 1.65
CASC4-204ENST00000557945 C2orf69Q8N8R5 385 aa25.35■■□□□ 1.65
CASC4-204ENST00000557945 ZNF341Q9BYN7 854 aa25.35■■□□□ 1.65
CASC4-204ENST00000557945 SERPINB13Q9UIV8 391 aa25.35■■□□□ 1.65
CASC4-204ENST00000557945 ANGEL1Q9UNK9 670 aaKnown RBP25.35■■□□□ 1.65
CASC4-204ENST00000557945 MOB2Q70IA6 237 aa25.34■■□□□ 1.65
CASC4-204ENST00000557945 STK11IPQ8N1F8 1099 aa25.34■■□□□ 1.65
CASC4-204ENST00000557945 HERC5Q9UII4 1024 aaKnown RBP25.34■■□□□ 1.65
CASC4-204ENST00000557945 SMIM22K7EJ46 135 aa25.33■■□□□ 1.65
CASC4-204ENST00000557945 EHD4Q9H223 541 aa25.33■■□□□ 1.65
CASC4-204ENST00000557945 CTNNA3Q9UI47 895 aa25.33■■□□□ 1.65
CASC4-204ENST00000557945 TBC1D12O60347 775 aa25.32■■□□□ 1.64
CASC4-204ENST00000557945 USP2O75604 605 aaPredicted RBP25.32■■□□□ 1.64
CASC4-204ENST00000557945 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
CASC4-204ENST00000557945 PPARAQ07869 468 aa25.32■■□□□ 1.64
CASC4-204ENST00000557945 DYNLL2Q96FJ2 89 aa25.32■■□□□ 1.64
CASC4-204ENST00000557945 LSG1Q9H089 658 aaKnown RBP25.32■■□□□ 1.64
CASC4-204ENST00000557945 ZMYM6O95789 1325 aa25.32■■□□□ 1.64
CASC4-204ENST00000557945 TRPM7Q96QT4 1865 aa25.32■■□□□ 1.64
CASC4-204ENST00000557945 TMEM88BA6NKF7 163 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 UBE2Q2LH0YL09 131 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 FKBP1BP68106 108 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 WRNIP1Q96S55 665 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 U3KPZ7 1027 aaPredicted RBP25.31■■□□□ 1.64
CASC4-204ENST00000557945 REC8O95072 547 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 SLC3A2P08195 630 aaKnown RBP25.31■■□□□ 1.64
CASC4-204ENST00000557945 APLP1P51693 650 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 C1QTNF8P60827 252 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 HAND2P61296 217 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 MAP3K10Q02779 954 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 METTL16Q86W50 562 aaKnown RBP25.31■■□□□ 1.64
CASC4-204ENST00000557945 MAP4K1Q92918 833 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 DNAJC18Q9H819 358 aa25.31■■□□□ 1.64
CASC4-204ENST00000557945 ABT1Q9ULW3 272 aaKnown RBP25.31■■□□□ 1.64
CASC4-204ENST00000557945 ZNF213O14771 459 aa25.3■■□□□ 1.64
CASC4-204ENST00000557945 GABPAQ06546 454 aa25.3■■□□□ 1.64
CASC4-204ENST00000557945 SLC44A5Q8NCS7 719 aa25.3■■□□□ 1.64
CASC4-204ENST00000557945 KLRG1Q96E93 195 aa25.3■■□□□ 1.64
CASC4-204ENST00000557945 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.3■■□□□ 1.64
CASC4-204ENST00000557945 RBM8AQ9Y5S9 174 aaKnown RBP25.3■■□□□ 1.64
CASC4-204ENST00000557945 SIPA1L1O43166 1804 aa25.29■■□□□ 1.64
CASC4-204ENST00000557945 PAPPA2Q9BXP8 1791 aa25.29■■□□□ 1.64
CASC4-204ENST00000557945 CTDSPL2Q05D32 466 aa25.29■■□□□ 1.64
CASC4-204ENST00000557945 IMMTQ16891 758 aaKnown RBP25.29■■□□□ 1.64
CASC4-204ENST00000557945 C16orf86Q6ZW13 317 aa25.29■■□□□ 1.64
CASC4-204ENST00000557945 SWAP70Q9UH65 585 aa25.29■■□□□ 1.64
CASC4-204ENST00000557945 CDK8P49336 464 aa25.28■■□□□ 1.64
CASC4-204ENST00000557945 MAP3K9P80192 1104 aa25.28■■□□□ 1.64
CASC4-204ENST00000557945 MAP3K11Q16584 847 aa25.28■■□□□ 1.64
CASC4-204ENST00000557945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.28■■□□□ 1.64
CASC4-204ENST00000557945 MKNK2Q9HBH9 465 aa25.28■■□□□ 1.64
CASC4-204ENST00000557945 ROBO3Q96MS0 1386 aa25.27■■□□□ 1.64
CASC4-204ENST00000557945 PHF20L1A8MW92 1017 aa25.27■■□□□ 1.64
CASC4-204ENST00000557945 INPP5BP32019 993 aa25.27■■□□□ 1.64
CASC4-204ENST00000557945 HUNKP57058 714 aa25.27■■□□□ 1.64
CASC4-204ENST00000557945 ZNF112Q9UJU3 913 aa25.27■■□□□ 1.64
CASC4-204ENST00000557945 ANAPC4Q9UJX5 808 aa25.27■■□□□ 1.64
CASC4-204ENST00000557945 LAMB1P07942 1786 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 SHMT1P34896 483 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 C8orf34Q49A92 452 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 ANKRD13AQ8IZ07 590 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 ZKSCAN4Q969J2 545 aaPredicted RBP25.26■■□□□ 1.63
CASC4-204ENST00000557945 ZNF287Q9HBT7 754 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 TAOK2Q9UL54 1235 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 CSADQ9Y600 493 aa25.26■■□□□ 1.63
CASC4-204ENST00000557945 PRDM1O75626 825 aa25.25■■□□□ 1.63
CASC4-204ENST00000557945 PDE4BQ07343 736 aa25.25■■□□□ 1.63
CASC4-204ENST00000557945 CERKLQ49MI3 558 aaPredicted RBP25.25■■□□□ 1.63
CASC4-204ENST00000557945 TATDN1Q6P1N9 297 aa25.25■■□□□ 1.63
CASC4-204ENST00000557945 SAPCD2Q86UD0 394 aa25.25■■□□□ 1.63
CASC4-204ENST00000557945 CREBZFQ9NS37 354 aa25.25■■□□□ 1.63
CASC4-204ENST00000557945 TLL2Q9Y6L7 1015 aa25.25■■□□□ 1.63
CASC4-204ENST00000557945 EIF5BO60841 1220 aaKnown RBP25.24■■□□□ 1.63
CASC4-204ENST00000557945 GDF11O95390 407 aa25.24■■□□□ 1.63
CASC4-204ENST00000557945 VGLL4Q14135 290 aa25.24■■□□□ 1.63
CASC4-204ENST00000557945 RRP1BQ14684 758 aaKnown RBP25.24■■□□□ 1.63
CASC4-204ENST00000557945 LDLRAD1Q5T700 205 aa25.24■■□□□ 1.63
CASC4-204ENST00000557945 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.24■■□□□ 1.63
CASC4-204ENST00000557945 CLMNQ96JQ2 1002 aa25.24■■□□□ 1.63
CASC4-204ENST00000557945 INCENPQ9NQS7 918 aa25.24■■□□□ 1.63
CASC4-204ENST00000557945 CTNND1O60716 968 aaKnown RBP25.23■■□□□ 1.63
CASC4-204ENST00000557945 TBC1D10CQ8IV04 446 aa25.23■■□□□ 1.63
CASC4-204ENST00000557945 NBPF3Q9H094 633 aa25.23■■□□□ 1.63
CASC4-204ENST00000557945 TOMM22Q9NS69 142 aa25.23■■□□□ 1.63
CASC4-204ENST00000557945 CYP21A2P08686 494 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 CAP2P40123 477 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 AKNAD1Q5T1N1 836 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 MFSD6Q6ZSS7 791 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 SCYL3Q8IZE3 742 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 ZNF444Q8N0Y2 327 aaPredicted RBP25.22■■□□□ 1.63
CASC4-204ENST00000557945 SLC10A4Q96EP9 437 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 RNF41Q9H4P4 317 aaPredicted RBP25.22■■□□□ 1.63
CASC4-204ENST00000557945 ELP3Q9H9T3 547 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 PICK1Q9NRD5 415 aa25.22■■□□□ 1.63
CASC4-204ENST00000557945 MPHOSPH10O00566 681 aaKnown RBP25.21■■□□□ 1.63
CASC4-204ENST00000557945 ABCB5Q2M3G0 1257 aa25.21■■□□□ 1.63
CASC4-204ENST00000557945 RRP12Q5JTH9 1297 aaKnown RBP25.21■■□□□ 1.63
CASC4-204ENST00000557945 CREB3L3Q68CJ9 461 aa25.21■■□□□ 1.63
CASC4-204ENST00000557945 STAG1Q8WVM7 1258 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms