RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	SPP2	Q13103	211 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	TMEM31	Q5JXX7	168 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	SLC39A5	Q6ZMH5	540 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	G2E3	Q7L622	706 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	CCDC84	Q86UT8	332 aa	Predicted RBP	11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	GPRC5A	Q8NFJ5	357 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	DNAAF4	Q8WXU2	420 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	NECAB3	Q96P71	396 aa	Predicted RBP	11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	DDX20	Q9UHI6	824 aa	Known RBP	11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	DAGLA	Q9Y4D2	1042 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	PTPRF	P10586	1907 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	MAST2	Q6P0Q8	1798 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	MROH5	Q6ZUA9	1318 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	LTBP2	Q14767	1821 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	TRIM43B	A6NCK2	446 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	SLC4A2	P04920	1241 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	ZEB1	P37275	1124 aa	Predicted RBP	11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	HMGCS2	P54868	508 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	CCDC85B	Q15834	202 aa	Predicted RBP	11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	MFSD14C	Q5VZR4	134 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	TSPYL6	Q8N831	410 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	ZNF280C	Q8ND82	737 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	WDR66	Q8TBY9	1149 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	USP6NL	Q92738	828 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	APBA2	Q99767	749 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	PUS3	Q9BZE2	481 aa	Known RBP	11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	PDLIM7	Q9NR12	457 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	PLXNB2	O15031	1838 aa		11.88	□□□□□ -0.51
PABPN1-208	ENST00000557702	ENTPD3	O75355	529 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	CNGA1	P29973	690 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	RGS3	P49796	1198 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	IRX3	P78415	501 aa	Predicted RBP	11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	DIXDC1	Q155Q3	683 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	TRIM60	Q495X7	471 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	EPHA10	Q5JZY3	1008 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	SH3RF1	Q7Z6J0	888 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	ARRDC4	Q8NCT1	418 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	TBC1D2	Q9BYX2	928 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	PRDM12	Q9H4Q4	367 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	EPHX3	Q9H6B9	360 aa		11.87	□□□□□ -0.51
PABPN1-208	ENST00000557702	BMP1	P13497	986 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	FLII	Q13045	1269 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	FKBP5	Q13451	457 aa	Predicted RBP	11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	MORN1	Q5T089	497 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	GJC2	Q5T442	439 aa	Predicted RBP	11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	GPR142	Q7Z601	462 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	PLEKHH3	Q7Z736	793 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	IDI2	Q9BXS1	227 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	TXNRD2	Q9NNW7	524 aa		11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	TCF20	Q9UGU0	1960 aa	Known RBP	11.86	□□□□□ -0.51
PABPN1-208	ENST00000557702	KBTBD13	C9JR72	458 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	IGFBP4	P22692	258 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	EPHB4	P54760	987 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	SNX17	Q15036	470 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	AAK1	Q2M2I8	961 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	SH3D19	Q5HYK7	790 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	METTL24	Q5JXM2	366 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	SH3BP5L	Q7L8J4	393 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	EDC3	Q96F86	508 aa	Known RBP	11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	P2RX7	Q99572	595 aa	Known RBP	11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	CWC22	Q9HCG8	908 aa	Known RBP	11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	TACC3	Q9Y6A5	838 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	UTY	O14607	1347 aa		11.85	□□□□□ -0.51
PABPN1-208	ENST00000557702	PHIP	Q8WWQ0	1821 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	DDTL	A6NHG4	134 aa	Predicted RBP	11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	PEX10	O60683	326 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	GPR37L1	O60883	481 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	SLURP2	P0DP57	97 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	ITGB8	P26012	769 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	HOXA7	P31268	230 aa	Predicted RBP	11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	MRE11	P49959	708 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	HERVK_113	P62684	666 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	ERVK-9	P63128	1117 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	ERVK-24	P63145	666 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	FPGS	Q05932	587 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	MAP2K5	Q13163	448 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	WDR43	Q15061	677 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702		Q3C1V9	767 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	C1orf53	Q5VUE5	145 aa		11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	CCER1	Q8TC90	406 aa	Predicted RBP	11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.84	□□□□□ -0.51
PABPN1-208	ENST00000557702	USP17L5	A8MUK1	530 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	TBC1D12	O60347	775 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	GLRX3	O76003	335 aa	Known RBP	11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	PDE8B	O95263	885 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	LDHB	P07195	334 aa	Known RBP	11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	IFIT1	P09914	478 aa	Known RBP	11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	RAG1	P15918	1043 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	PRDX5	P30044	214 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	ATP2B2	Q01814	1243 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	ADGRE1	Q14246	886 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	CCDC129	Q6ZRS4	1044 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	PORCN	Q9H237	461 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms