RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 JAG1P78504 1218 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 VGLL4Q14135 290 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 SUPT20HL1Q3ZLR7 823 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-226ENST00000557585 KBTBD3Q8NAB2 608 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRKCH-226ENST00000557585 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 GPATCH3Q96I76 525 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 DNAJC18Q9H819 358 aa12.66□□□□□ -0.38
PRKCH-226ENST00000557585 CYP2D7A0A087X1C5 515 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
PRKCH-226ENST00000557585 FKBP1BP68106 108 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
PRKCH-226ENST00000557585 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 WRNIP1Q96S55 665 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 SNCAIPQ9Y6H5 919 aa12.65□□□□□ -0.38
PRKCH-226ENST00000557585 RPAP1Q9BWH6 1393 aaPredicted RBP12.65□□□□□ -0.38
PRKCH-226ENST00000557585 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
PRKCH-226ENST00000557585 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
PRKCH-226ENST00000557585 BAG3O95817 575 aa12.64□□□□□ -0.39
PRKCH-226ENST00000557585 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
PRKCH-226ENST00000557585 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
PRKCH-226ENST00000557585 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
PRKCH-226ENST00000557585 ERC2O15083 957 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 PPP1R12BO60237 982 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-226ENST00000557585 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
PRKCH-226ENST00000557585 USP5P45974 858 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 IREB2P48200 963 aaKnown RBP12.63□□□□□ -0.39
PRKCH-226ENST00000557585 PLCD1P51178 756 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 MAP3K9P80192 1104 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 UBE3CQ15386 1083 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 SLC10A4Q96EP9 437 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
PRKCH-226ENST00000557585 SIPA1L1O43166 1804 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 POTEB2H3BUK9 544 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 FOXP2O15409 715 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-226ENST00000557585 HSPA1AP0DMV8 641 aaKnown RBP12.62□□□□□ -0.39
PRKCH-226ENST00000557585 HSPA1BP0DMV9 641 aaKnown RBP12.62□□□□□ -0.39
PRKCH-226ENST00000557585 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 SPRYD7Q5W111 196 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 RILPL2Q969X0 211 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 STRBPQ96SI9 672 aaKnown RBP12.62□□□□□ -0.39
PRKCH-226ENST00000557585 ZNF341Q9BYN7 854 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRKCH-226ENST00000557585 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-226ENST00000557585 ZNF112Q9UJU3 913 aa12.62□□□□□ -0.39
PRKCH-226ENST00000557585 A0A0D9SFI3 127 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 FOXN1O15353 648 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-226ENST00000557585 PLCG2P16885 1265 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 ECE1P42892 770 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 ANKRD13AQ8IZ07 590 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 IL25Q9H293 177 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRKCH-226ENST00000557585 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-226ENST00000557585 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-226ENST00000557585 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
PRKCH-226ENST00000557585 THSD7BQ9C0I4 1608 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 CDK5RAP2Q96SN8 1893 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 GSG1L2A8MUP6 293 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 TRIM6-TRIM34B2RNG4 842 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 GPAA1O43292 621 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 GDF11O95390 407 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-226ENST00000557585 DCAF15Q66K64 600 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 APPBP2Q92624 585 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 CCDC102AQ96A19 550 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 PTPN18Q99952 460 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 TMEM106CQ9BVX2 250 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 CRNKL1Q9BZJ0 848 aaKnown RBP12.6□□□□□ -0.39
PRKCH-226ENST00000557585 PCDHB8Q9UN66 801 aa12.6□□□□□ -0.39
PRKCH-226ENST00000557585 IRF6O14896 467 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 NOGQ13253 232 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 DGKZQ13574 1117 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 ZNF589Q86UQ0 364 aaPredicted RBP12.59□□□□□ -0.39
PRKCH-226ENST00000557585 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 MCM9Q9NXL9 1143 aa12.59□□□□□ -0.39
PRKCH-226ENST00000557585 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 USP17L21D6R901 530 aa12.58□□□□□ -0.4
PRKCH-226ENST00000557585 IGF2BP3O00425 579 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRKCH-226ENST00000557585 IGSF3O75054 1194 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms