RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 MIGA1Q8NAN2 632 aa27.53■■■□□ 2
PABPN1-207ENST00000556821 BRI3BPQ8WY22 251 aa27.53■■■□□ 2
PABPN1-207ENST00000556821 FLT1P17948 1338 aa27.52■■■□□ 2
PABPN1-207ENST00000556821 IRF6O14896 467 aa27.52■■■□□ 2
PABPN1-207ENST00000556821 ERO1AQ96HE7 468 aa27.52■■■□□ 2
PABPN1-207ENST00000556821 BOLA2Q9H3K6 86 aa27.52■■■□□ 2
PABPN1-207ENST00000556821 ZSWIM8A7E2V4 1837 aa27.52■■■□□ 2
PABPN1-207ENST00000556821 LOC285556D6RIA3 1793 aa27.52■■■□□ 2
PABPN1-207ENST00000556821 CCL15-CCL14A0A0B4J2E2 113 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 FAM196BA6NMK8 535 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 GTF2A2P52657 109 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 PPATQ06203 517 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 CCL15Q16663 113 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 TMED8Q6PL24 325 aaPredicted RBP27.51■■□□□ 1.99
PABPN1-207ENST00000556821 MAPKAPK5Q8IW41 473 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 TGFBRAP1Q8WUH2 860 aa27.51■■□□□ 1.99
PABPN1-207ENST00000556821 TBC1D12O60347 775 aa27.5■■□□□ 1.99
PABPN1-207ENST00000556821 PDE6AP16499 860 aa27.5■■□□□ 1.99
PABPN1-207ENST00000556821 CD99L2Q8TCZ2 262 aa27.5■■□□□ 1.99
PABPN1-207ENST00000556821 HAUS7Q99871 368 aa27.5■■□□□ 1.99
PABPN1-207ENST00000556821 PAG1Q9NWQ8 432 aa27.5■■□□□ 1.99
PABPN1-207ENST00000556821 KIAA0100Q14667 2235 aaKnown RBP27.49■■□□□ 1.99
PABPN1-207ENST00000556821 SCYL3Q8IZE3 742 aa27.49■■□□□ 1.99
PABPN1-207ENST00000556821 RIOK1Q9BRS2 568 aaKnown RBP27.49■■□□□ 1.99
PABPN1-207ENST00000556821 TCRBV5S4A2TA0A5A2 114 aa27.48■■□□□ 1.99
PABPN1-207ENST00000556821 SLC9C2Q5TAH2 1124 aa27.48■■□□□ 1.99
PABPN1-207ENST00000556821 ZNF333Q96JL9 665 aa27.48■■□□□ 1.99
PABPN1-207ENST00000556821 EFCC1Q9HA90 598 aa27.48■■□□□ 1.99
PABPN1-207ENST00000556821 MGAMO43451 1857 aa27.47■■□□□ 1.99
PABPN1-207ENST00000556821 CRHR2Q13324 411 aa27.47■■□□□ 1.99
PABPN1-207ENST00000556821 FAM43AQ8N2R8 423 aa27.47■■□□□ 1.99
PABPN1-207ENST00000556821 ECHDC1Q9NTX5 307 aa27.47■■□□□ 1.99
PABPN1-207ENST00000556821 KCNH4Q9UQ05 1017 aa27.47■■□□□ 1.99
PABPN1-207ENST00000556821 ZNF532Q9HCE3 1301 aa27.46■■□□□ 1.99
PABPN1-207ENST00000556821 SNAPC2Q13487 334 aa27.46■■□□□ 1.99
PABPN1-207ENST00000556821 CERS3Q8IU89 383 aa27.46■■□□□ 1.99
PABPN1-207ENST00000556821 DHX36Q9H2U1 1008 aaKnown RBP27.46■■□□□ 1.99
PABPN1-207ENST00000556821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.46■■□□□ 1.99
PABPN1-207ENST00000556821 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.46■■□□□ 1.99
PABPN1-207ENST00000556821 CTNND1O60716 968 aaKnown RBP27.45■■□□□ 1.98
PABPN1-207ENST00000556821 CETPP11597 493 aa27.45■■□□□ 1.98
PABPN1-207ENST00000556821 RRP1BQ14684 758 aaKnown RBP27.45■■□□□ 1.98
PABPN1-207ENST00000556821 OTUD7BQ6GQQ9 843 aa27.45■■□□□ 1.98
PABPN1-207ENST00000556821 DNAJC18Q9H819 358 aa27.45■■□□□ 1.98
PABPN1-207ENST00000556821 PALD1Q9ULE6 856 aa27.45■■□□□ 1.98
PABPN1-207ENST00000556821 BRCA2P51587 3418 aa27.45■■□□□ 1.98
PABPN1-207ENST00000556821 PTPRAP18433 802 aa27.44■■□□□ 1.98
PABPN1-207ENST00000556821 SP3Q02447 781 aa27.44■■□□□ 1.98
PABPN1-207ENST00000556821 SLFNL1Q499Z3 407 aa27.44■■□□□ 1.98
PABPN1-207ENST00000556821 TSHZ3Q63HK5 1081 aa27.44■■□□□ 1.98
PABPN1-207ENST00000556821 PI4KBQ9UBF8 816 aa27.44■■□□□ 1.98
PABPN1-207ENST00000556821 SAP30BPQ9UHR5 308 aaKnown RBP27.44■■□□□ 1.98
PABPN1-207ENST00000556821 HERC5Q9UII4 1024 aaKnown RBP27.44■■□□□ 1.98
PABPN1-207ENST00000556821 CENPFP49454 3210 aa27.44■■□□□ 1.98
PABPN1-207ENST00000556821 CHGBP05060 677 aa27.43■■□□□ 1.98
PABPN1-207ENST00000556821 ADD2P35612 726 aa27.43■■□□□ 1.98
PABPN1-207ENST00000556821 HDAC1Q13547 482 aaPredicted RBP27.43■■□□□ 1.98
PABPN1-207ENST00000556821 MOGSQ13724 837 aa27.43■■□□□ 1.98
PABPN1-207ENST00000556821 METTL16Q86W50 562 aaKnown RBP27.43■■□□□ 1.98
PABPN1-207ENST00000556821 TMEM106CQ9BVX2 250 aa27.43■■□□□ 1.98
PABPN1-207ENST00000556821 MAGEB6P1A0A0J9YX57 407 aa27.42■■□□□ 1.98
PABPN1-207ENST00000556821 BTBD19C9JJ37 291 aa27.42■■□□□ 1.98
PABPN1-207ENST00000556821 H0YGN5 161 aa27.42■■□□□ 1.98
PABPN1-207ENST00000556821 CCDC84Q86UT8 332 aaPredicted RBP27.42■■□□□ 1.98
PABPN1-207ENST00000556821 OTUD7AQ8TE49 926 aaPredicted RBP27.42■■□□□ 1.98
PABPN1-207ENST00000556821 PICK1Q9NRD5 415 aa27.42■■□□□ 1.98
PABPN1-207ENST00000556821 RBBP6Q7Z6E9 1792 aaKnown RBP27.42■■□□□ 1.98
PABPN1-207ENST00000556821 TAF1CQ15572 869 aaPredicted RBP27.41■■□□□ 1.98
PABPN1-207ENST00000556821 ZHX2Q9Y6X8 837 aa27.41■■□□□ 1.98
PABPN1-207ENST00000556821 USP5P45974 858 aa27.4■■□□□ 1.98
PABPN1-207ENST00000556821 AAMPQ13685 434 aa27.4■■□□□ 1.98
PABPN1-207ENST00000556821 SLC4A8Q2Y0W8 1093 aa27.4■■□□□ 1.98
PABPN1-207ENST00000556821 LCORLQ8N3X6 602 aa27.4■■□□□ 1.98
PABPN1-207ENST00000556821 EXOC6Q8TAG9 804 aa27.4■■□□□ 1.98
PABPN1-207ENST00000556821 ZCCHC17Q9NP64 241 aaKnown RBP27.4■■□□□ 1.98
PABPN1-207ENST00000556821 AFG3L2Q9Y4W6 797 aa27.4■■□□□ 1.98
PABPN1-207ENST00000556821 SUPT16HQ9Y5B9 1047 aaKnown RBP27.4■■□□□ 1.98
PABPN1-207ENST00000556821 CXCL11O14625 94 aa27.39■■□□□ 1.98
PABPN1-207ENST00000556821 CAP2P40123 477 aa27.39■■□□□ 1.98
PABPN1-207ENST00000556821 GPATCH3Q96I76 525 aa27.39■■□□□ 1.98
PABPN1-207ENST00000556821 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.39■■□□□ 1.981e-11■■□□□ 13.8
PABPN1-207ENST00000556821 SALL3Q9BXA9 1300 aa27.39■■□□□ 1.97
PABPN1-207ENST00000556821 FOXP4Q8IVH2 680 aaPredicted RBP27.38■■□□□ 1.97
PABPN1-207ENST00000556821 TTC41PQ6P2S7 1318 aa27.38■■□□□ 1.97
PABPN1-207ENST00000556821 A0A0G2JLL6 359 aaPredicted RBP27.37■■□□□ 1.97
PABPN1-207ENST00000556821 JAG1P78504 1218 aa27.37■■□□□ 1.97
PABPN1-207ENST00000556821 UBE3CQ15386 1083 aa27.37■■□□□ 1.97
PABPN1-207ENST00000556821 PRRT2Q7Z6L0 340 aaPredicted RBP27.37■■□□□ 1.97
PABPN1-207ENST00000556821 ANKRD23Q86SG2 305 aa27.37■■□□□ 1.97
PABPN1-207ENST00000556821 PI4K2BQ8TCG2 481 aa27.37■■□□□ 1.97
PABPN1-207ENST00000556821 CRNKL1Q9BZJ0 848 aaKnown RBP27.37■■□□□ 1.97
PABPN1-207ENST00000556821 ARMT1Q9H993 441 aa27.37■■□□□ 1.97
PABPN1-207ENST00000556821 HLA-DOAP06340 250 aa27.36■■□□□ 1.97
PABPN1-207ENST00000556821 SHROOM1Q2M3G4 852 aaPredicted RBP27.36■■□□□ 1.97
PABPN1-207ENST00000556821 CRACR2BQ8N4Y2 399 aaPredicted RBP27.36■■□□□ 1.97
PABPN1-207ENST00000556821 SDR42E1Q8WUS8 393 aa27.36■■□□□ 1.97
PABPN1-207ENST00000556821 ZFYVE28Q9HCC9 887 aa27.36■■□□□ 1.97
PABPN1-207ENST00000556821 PTCH2Q9Y6C5 1203 aa27.36■■□□□ 1.97
PABPN1-207ENST00000556821 SZT2Q5T011 3432 aa27.36■■□□□ 1.97
PABPN1-207ENST00000556821 MBD4O95243 580 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms