RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 CCL15-CCL14A0A0B4J2E2 113 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 IRF6O14896 467 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 DGKZQ13574 1117 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 CCL15Q16663 113 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 BMP2KLQ5H9B9 411 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 BRI3BPQ8WY22 251 aa12.53□□□□□ -0.4
HNRNPC-225ENST00000556513 MYH8P13535 1937 aa12.52□□□□□ -0.4
HNRNPC-225ENST00000556513 PHF20L1A8MW92 1017 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 PLCG2P16885 1265 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 ATP5JP18859 108 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 GTF2A2P52657 109 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 PPP4CP60510 307 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 PPIL2Q13356 520 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 TTF1Q15361 905 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 OTUD7BQ6GQQ9 843 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-225ENST00000556513 HTTP42858 3142 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 FLT1P17948 1338 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 GPR25O00155 361 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 PPATQ06203 517 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 CRHR2Q13324 411 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-225ENST00000556513 ZSWIM8A7E2V4 1837 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 CETPP11597 493 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 PDE6AP16499 860 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 USP5P45974 858 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 TSHZ3Q63HK5 1081 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 CFHR5Q9BXR6 569 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 PALD1Q9ULE6 856 aa12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-225ENST00000556513 ZNF532Q9HCE3 1301 aa12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 FKTNO75072 461 aa12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 TAF1CQ15572 869 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 SLFNL1Q499Z3 407 aa12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 HAUS7Q99871 368 aa12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 ZHX2Q9Y6X8 837 aa12.49□□□□□ -0.41
HNRNPC-225ENST00000556513 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 BTBD19C9JJ37 291 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 CTNND1O60716 968 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 CHGBP05060 677 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 PTPRAP18433 802 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 BECN1Q14457 450 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 CTU1Q7Z7A3 348 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 GPATCH3Q96I76 525 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 PI4KBQ9UBF8 816 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 TTC41PQ6P2S7 1318 aa12.48□□□□□ -0.41
HNRNPC-225ENST00000556513 TCRBV5S4A2TA0A5A2 114 aa12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 TBC1D12O60347 775 aa12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 MGAMO43451 1857 aa12.47□□□□□ -0.41
HNRNPC-225ENST00000556513 TRIM75PA6NK02 468 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 HLA-DOAP06340 250 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 DNAJC18Q9H819 358 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 ZFYVE28Q9HCC9 887 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 HERC5Q9UII4 1024 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 AFG3L2Q9Y4W6 797 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.41
HNRNPC-225ENST00000556513 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.42
HNRNPC-225ENST00000556513 PDHXO00330 501 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 GDF11O95390 407 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 ADD2P35612 726 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 CAP2P40123 477 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 MOGSQ13724 837 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 SHROOM1Q2M3G4 852 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 CD99L2Q8TCZ2 262 aa12.45□□□□□ -0.42
HNRNPC-225ENST00000556513 SDR42E1Q8WUS8 393 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms