RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SAPCD2Q86UD0 394 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 C12orf60Q5U649 245 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 METTL16Q86W50 562 aaKnown RBP16.9■□□□□ 0.3
SNX6-206ENST00000556162 KLRG1Q96E93 195 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 EHD4Q9H223 541 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 IL25Q9H293 177 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 TLL2Q9Y6L7 1015 aa16.9■□□□□ 0.3
SNX6-206ENST00000556162 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
SNX6-206ENST00000556162 FOXP2O15409 715 aa16.89■□□□□ 0.29
SNX6-206ENST00000556162 CYP2D6P10635 497 aa16.89■□□□□ 0.29
SNX6-206ENST00000556162 ALX1Q15699 326 aa16.89■□□□□ 0.29
SNX6-206ENST00000556162 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
SNX6-206ENST00000556162 ESYT1Q9BSJ8 1104 aa16.89■□□□□ 0.29
SNX6-206ENST00000556162 CYP2D7A0A087X1C5 515 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 FGAP02671 866 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 SLURP2P0DP57 97 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 ANKRD13AQ8IZ07 590 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 ZNF112Q9UJU3 913 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 MYH1P12882 1939 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 FAM196BA6NMK8 535 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 LDLRAD1Q5T700 205 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNX6-206ENST00000556162 DSCC1Q9BVC3 393 aa16.88■□□□□ 0.29
SNX6-206ENST00000556162 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
SNX6-206ENST00000556162 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
SNX6-206ENST00000556162 CSADQ9Y600 493 aa16.87■□□□□ 0.29
SNX6-206ENST00000556162 NAV1Q8NEY1 1877 aa16.87■□□□□ 0.29
SNX6-206ENST00000556162 PHF20L1A8MW92 1017 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 EVX2Q03828 476 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 HHIPL1Q96JK4 782 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 SWAP70Q9UH65 585 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 SLC3A2P08195 630 aaKnown RBP16.86■□□□□ 0.29
SNX6-206ENST00000556162 HTRA3P83110 453 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 GABPAQ06546 454 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
SNX6-206ENST00000556162 ZKSCAN4Q969J2 545 aaPredicted RBP16.86■□□□□ 0.29
SNX6-206ENST00000556162 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 DYNLL2Q96FJ2 89 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.86■□□□□ 0.29
SNX6-206ENST00000556162 CTNNA3Q9UI47 895 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 ZMYM6O95789 1325 aa16.86■□□□□ 0.29
SNX6-206ENST00000556162 BAZ2AQ9UIF9 1905 aaKnown RBP16.85■□□□□ 0.29
SNX6-206ENST00000556162 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
SNX6-206ENST00000556162 INPP5BP32019 993 aa16.85■□□□□ 0.29
SNX6-206ENST00000556162 ZNF157P51786 506 aaPredicted RBP16.85■□□□□ 0.29
SNX6-206ENST00000556162 PPARAQ07869 468 aa16.85■□□□□ 0.29
SNX6-206ENST00000556162 VGLL4Q14135 290 aa16.85■□□□□ 0.29
SNX6-206ENST00000556162 RGMBQ6NW40 437 aa16.85■□□□□ 0.29
SNX6-206ENST00000556162 RASSF10A6NK89 507 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 SMIM22K7EJ46 135 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 PTH1RQ03431 593 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
SNX6-206ENST00000556162 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 CLMNQ96JQ2 1002 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
SNX6-206ENST00000556162 ZNF213O14771 459 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 CAP2P40123 477 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 CDK8P49336 464 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 CERKLQ49MI3 558 aaPredicted RBP16.84■□□□□ 0.29
SNX6-206ENST00000556162 MKNK2Q9HBH9 465 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 ANO2Q9NQ90 1003 aa16.84■□□□□ 0.29
SNX6-206ENST00000556162 SHMT1P34896 483 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 PDE4BQ07343 736 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 SLC44A5Q8NCS7 719 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 CCDC102AQ96A19 550 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 ELP3Q9H9T3 547 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 PICK1Q9NRD5 415 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.28
SNX6-206ENST00000556162 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
SNX6-206ENST00000556162 RRP1BQ14684 758 aaKnown RBP16.82■□□□□ 0.28
SNX6-206ENST00000556162 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
SNX6-206ENST00000556162 NOL9Q5SY16 702 aaKnown RBP16.82■□□□□ 0.28
SNX6-206ENST00000556162 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
SNX6-206ENST00000556162 HAND2P61296 217 aa16.82■□□□□ 0.28
SNX6-206ENST00000556162 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
SNX6-206ENST00000556162 LSG1Q9H089 658 aaKnown RBP16.82■□□□□ 0.28
SNX6-206ENST00000556162 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
SNX6-206ENST00000556162 SIPA1L1O43166 1804 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 GDF11O95390 407 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 ASNSP08243 561 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 ECE1P42892 770 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 GRM1Q13255 1194 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 CYP4F22Q6NT55 531 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 ZNF444Q8N0Y2 327 aaPredicted RBP16.81■□□□□ 0.28
SNX6-206ENST00000556162 CCDC17Q96LX7 622 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 CABP5Q9NP86 173 aa16.81■□□□□ 0.28
SNX6-206ENST00000556162 GINM1Q9NU53 330 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms