RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 SAMM50Q9Y512 469 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 IFT74Q96LB3 600 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CCNK-203ENST00000553865 BRD1O95696 1058 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 KRT13P13646 458 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 NAPAP54920 295 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 ATP11AP98196 1134 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 PUM3Q15397 648 aaKnown RBP10.25□□□□□ -0.77
CCNK-203ENST00000553865 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 FAM227BQ96M60 508 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 SPAG5Q96R06 1193 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 SELENOSQ9BQE4 189 aa10.25□□□□□ -0.77
CCNK-203ENST00000553865 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
CCNK-203ENST00000553865 KNDC1Q76NI1 1749 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 BICDL2A1A5D9 508 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 PCK1P35558 622 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 DENND2AQ9ULE3 1009 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 TUBBP07437 444 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 ARL1P40616 181 aaPredicted RBP10.24□□□□□ -0.77
CCNK-203ENST00000553865 MYL5Q02045 173 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 GOLGA1Q92805 767 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 IBTKQ9P2D0 1353 aaPredicted RBP10.24□□□□□ -0.77
CCNK-203ENST00000553865 GMNNO75496 209 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 ATP5JP18859 108 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 CLNS1AP54105 237 aaKnown RBP10.24□□□□□ -0.77
CCNK-203ENST00000553865 KRT83P78385 493 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 BRINP3Q76B58 766 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 IL17REQ8NFR9 667 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 FAM114A2Q9NRY5 505 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 IFNKQ9P0W0 207 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 B4DLN1 442 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 MRPL12P52815 198 aaKnown RBP10.24□□□□□ -0.77
CCNK-203ENST00000553865 CCDC63Q8NA47 563 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCNK-203ENST00000553865 TRIM7Q9C029 511 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 CCDC87Q9NVE4 849 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 RABGAP1Q9Y3P9 1069 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 USH1CQ9Y6N9 552 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 ADGRB2O60241 1585 aa10.24□□□□□ -0.77
CCNK-203ENST00000553865 KIF1AQ12756 1690 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 PDE8AO60658 829 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 MBD4O95243 580 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 DEXIO95424 95 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 ITGA6P23229 1130 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 TIMM10P62072 90 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 CCDC50Q8IVM0 306 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 IQUBQ8NA54 791 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 KIAA1524Q8TCG1 905 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
CCNK-203ENST00000553865 BICD1Q96G01 975 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 ACSBG1Q96GR2 724 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 DSCC1Q9BVC3 393 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 VPS18Q9P253 973 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 CHMP4BP1P59074 171 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 ASIC1P78348 528 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 ANO1Q5XXA6 986 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 ANGEL1Q9UNK9 670 aaKnown RBP10.23□□□□□ -0.77
CCNK-203ENST00000553865 GNA11P29992 359 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 B4GALNT4Q76KP1 1039 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 SMC1BQ8NDV3 1235 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 FLAD1Q8NFF5 587 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.774e-7■□□□□ 10.4
CCNK-203ENST00000553865 USP44Q9H0E7 712 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCNK-203ENST00000553865 TTC36A6NLP5 189 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 PPP1R2P41236 205 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 MIGA1Q8NAN2 632 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 UBR1Q8IWV7 1749 aa10.23□□□□□ -0.77
CCNK-203ENST00000553865 CTAGE9A4FU28 777 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 STMN1P16949 149 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 LEO1Q8WVC0 666 aaPredicted RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 HMGB1P1B2RPK0 211 aaPredicted RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 PPP2R5BQ15173 497 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 SLC4A8Q2Y0W8 1093 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 HELBQ8NG08 1087 aaPredicted RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 NAP1L4Q99733 375 aaKnown RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 MCM9Q9NXL9 1143 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 NEDD9Q14511 834 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 LMBR1Q8WVP7 490 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 VCXQ9H320 206 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 OGFRQ9NZT2 677 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 SH3TC1Q8TE82 1336 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 NEURL1BA8MQ27 555 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 ZEB2O60315 1214 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 INTS8Q75QN2 995 aaKnown RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 FMNL3Q8IVF7 1028 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 FAM76AQ8TAV0 307 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 SEC62Q99442 399 aaKnown RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 RNF216Q9NWF9 866 aaPredicted RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 GPAA1O43292 621 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 GBP1P32455 592 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 MRPS9P82933 396 aaKnown RBP10.22□□□□□ -0.77
CCNK-203ENST00000553865 TSNAXIP1Q2TAA8 658 aa10.22□□□□□ -0.77
CCNK-203ENST00000553865 POTEDQ86YR6 584 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms