RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 EIF6P56537 245 aaKnown RBP20.7■□□□□ 0.9
PSEN1-206ENST00000553447 OGFOD1Q8N543 542 aa20.7■□□□□ 0.9
PSEN1-206ENST00000553447 IGDCC4Q8TDY8 1250 aa20.7■□□□□ 0.9
PSEN1-206ENST00000553447 ZNF274Q96GC6 653 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-206ENST00000553447 IDI2Q9BXS1 227 aa20.7■□□□□ 0.9
PSEN1-206ENST00000553447 OSBPL5Q9H0X9 879 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-206ENST00000553447 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-206ENST00000553447 SIPA1L1O43166 1804 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
PSEN1-206ENST00000553447 PFKFB2O60825 505 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 NFIAQ12857 509 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 STK3Q13188 491 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 TMEM67Q5HYA8 995 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 GTF3C6Q969F1 213 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 DYNLL2Q96FJ2 89 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 PRMT6Q96LA8 375 aaPredicted RBP20.69■□□□□ 0.9
PSEN1-206ENST00000553447 LY9Q9HBG7 655 aa20.69■□□□□ 0.9
PSEN1-206ENST00000553447 KLF18A0A0U1RQI7 1052 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 SPDYE2BA6NHP3 402 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
PSEN1-206ENST00000553447 NPM3O75607 178 aaKnown RBP20.68■□□□□ 0.9
PSEN1-206ENST00000553447 SPDYE6P0CI01 402 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 LMNB1P20700 586 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 RPS12P25398 132 aaKnown RBP20.68■□□□□ 0.9
PSEN1-206ENST00000553447 PDIA3P30101 505 aaKnown RBP20.68■□□□□ 0.9
PSEN1-206ENST00000553447 LIFRP42702 1097 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 SART3Q15020 963 aaKnown RBP20.68■□□□□ 0.9
PSEN1-206ENST00000553447 DLGAP5Q15398 846 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 TTC6Q86TZ1 520 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 MTMR14Q8NCE2 650 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
PSEN1-206ENST00000553447 BRPF3Q9ULD4 1205 aa20.68■□□□□ 0.9
PSEN1-206ENST00000553447 MMP14P50281 582 aa20.67■□□□□ 0.9
PSEN1-206ENST00000553447 C16orf86Q6ZW13 317 aa20.67■□□□□ 0.9
PSEN1-206ENST00000553447 ZKSCAN3Q9BRR0 538 aa20.67■□□□□ 0.9
PSEN1-206ENST00000553447 UBAC1Q9BSL1 405 aa20.67■□□□□ 0.9
PSEN1-206ENST00000553447 ERICH2A1L162 156 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 YBX3P16989 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
PSEN1-206ENST00000553447 CACNB3P54284 484 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 SCRN1Q12765 414 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 WTAPQ15007 396 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 SGMS1Q86VZ5 419 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 MKNK2Q9HBH9 465 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 ZNF287Q9HBT7 754 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 SENP2Q9HC62 589 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 FAM198AQ9UFP1 575 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 NAP1L2Q9ULW6 460 aaPredicted RBP20.66■□□□□ 0.9
PSEN1-206ENST00000553447 SMC3Q9UQE7 1217 aa20.66■□□□□ 0.9
PSEN1-206ENST00000553447 COL2A1P02458 1487 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-206ENST00000553447 TNKSO95271 1327 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 ZNF541Q9H0D2 1346 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 GOLGA8BA8MQT2 603 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 CDK8P49336 464 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 SEC23AQ15436 765 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 IQCA1Q86XH1 822 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 SLC44A5Q8NCS7 719 aa20.65■□□□□ 0.9
PSEN1-206ENST00000553447 ZSCAN10Q96SZ4 725 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-206ENST00000553447 ENTPD3O75355 529 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 HLA-DOAP06340 250 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 GMPSP49915 693 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-206ENST00000553447 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-206ENST00000553447 CCT2P78371 535 aaKnown RBP20.64■□□□□ 0.89
PSEN1-206ENST00000553447 FAM47AQ5JRC9 791 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 NFXL1Q6ZNB6 911 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 ZFPM1Q8IX07 1006 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 TMTC2Q8N394 836 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 ZBED3Q96IU2 234 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-206ENST00000553447 TMOD2Q9NZR1 351 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 HPS5Q9UPZ3 1129 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 GJA3Q9Y6H8 435 aa20.64■□□□□ 0.89
PSEN1-206ENST00000553447 CCDC69A6NI79 296 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 RASA1P20936 1047 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 NUCB2P80303 420 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 TFAP4Q01664 338 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 GABPAQ06546 454 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 TCP10Q12799 353 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 SPDYE2Q495Y8 402 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 ZNF444Q8N0Y2 327 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-206ENST00000553447 ENAHQ8N8S7 591 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-206ENST00000553447 DPF2Q92785 391 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 LLPHQ9BRT6 129 aaKnown RBP20.63■□□□□ 0.89
PSEN1-206ENST00000553447 DHX36Q9H2U1 1008 aaKnown RBP20.63■□□□□ 0.89
PSEN1-206ENST00000553447 MYOZ2Q9NPC6 264 aa20.63■□□□□ 0.89
PSEN1-206ENST00000553447 ZNF70Q9UC06 446 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-206ENST00000553447 SHTN1A0MZ66 631 aa20.62■□□□□ 0.89
PSEN1-206ENST00000553447 GJB2P29033 226 aa20.62■□□□□ 0.89
PSEN1-206ENST00000553447 RAB3GAP1Q15042 981 aa20.62■□□□□ 0.89
PSEN1-206ENST00000553447 EHD4Q9H223 541 aa20.62■□□□□ 0.89
PSEN1-206ENST00000553447 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
PSEN1-206ENST00000553447 SERPINB13Q9UIV8 391 aa20.62■□□□□ 0.89
PSEN1-206ENST00000553447 NID2Q14112 1375 aa20.61■□□□□ 0.89
PSEN1-206ENST00000553447 ATRNL1Q5VV63 1379 aa20.61■□□□□ 0.89
PSEN1-206ENST00000553447 CLRN2A0PK11 232 aa20.61■□□□□ 0.89
PSEN1-206ENST00000553447 ZBTB43O43298 467 aa20.61■□□□□ 0.89
PSEN1-206ENST00000553447 SH3BP5LQ7L8J4 393 aa20.61■□□□□ 0.89
PSEN1-206ENST00000553447 NCOA5Q9HCD5 579 aaKnown RBP20.61■□□□□ 0.89
PSEN1-206ENST00000553447 SLC12A7Q9Y666 1083 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms