RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CHMP3Q9Y3E7 222 aa17.22■□□□□ 0.35
SNRPF-203ENST00000551316 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 SIPA1L1O43166 1804 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 CFAP54Q96N23 3096 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 PBX2P40425 430 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 MRE11P49959 708 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
SNRPF-203ENST00000551316 PICK1Q9NRD5 415 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
SNRPF-203ENST00000551316 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
SNRPF-203ENST00000551316 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
SNRPF-203ENST00000551316 ASCC2Q9H1I8 757 aaPredicted RBP17.2■□□□□ 0.34
SNRPF-203ENST00000551316 MORF4L1Q9UBU8 362 aa17.2■□□□□ 0.34
SNRPF-203ENST00000551316 TMEM31Q5JXX7 168 aa17.19■□□□□ 0.34
SNRPF-203ENST00000551316 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
SNRPF-203ENST00000551316 FBXO33Q7Z6M2 555 aa17.19■□□□□ 0.34
SNRPF-203ENST00000551316 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
SNRPF-203ENST00000551316 FAM196BA6NMK8 535 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 GRXCR1A8MXD5 290 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 XRCC5P13010 732 aaKnown RBP17.18■□□□□ 0.34
SNRPF-203ENST00000551316 UBE4AQ14139 1066 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
SNRPF-203ENST00000551316 HHIPL2Q6UWX4 724 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 TRPV1Q8NER1 839 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 PORCNQ9H237 461 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 PNMA3Q9UL41 463 aa17.18■□□□□ 0.34
SNRPF-203ENST00000551316 GCLCP48506 637 aaPredicted RBP17.17■□□□□ 0.34
SNRPF-203ENST00000551316 HMGCS2P54868 508 aa17.17■□□□□ 0.34
SNRPF-203ENST00000551316 SNX17Q15036 470 aa17.17■□□□□ 0.34
SNRPF-203ENST00000551316 LMBR1LQ6UX01 489 aa17.17■□□□□ 0.34
SNRPF-203ENST00000551316 SLC39A5Q6ZMH5 540 aa17.17■□□□□ 0.34
SNRPF-203ENST00000551316 GAS2L1Q99501 681 aaPredicted RBP17.17■□□□□ 0.34
SNRPF-203ENST00000551316 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
SNRPF-203ENST00000551316 DNM1LO00429 736 aa17.16■□□□□ 0.34
SNRPF-203ENST00000551316 MORN1Q5T089 497 aa17.16■□□□□ 0.34
SNRPF-203ENST00000551316 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
SNRPF-203ENST00000551316 SOCS4Q8WXH5 440 aa17.16■□□□□ 0.34
SNRPF-203ENST00000551316 MRIQ9BWK5 157 aa17.16■□□□□ 0.34
SNRPF-203ENST00000551316 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
SNRPF-203ENST00000551316 DDTLA6NHG4 134 aaPredicted RBP17.15■□□□□ 0.34
SNRPF-203ENST00000551316 PROCA1Q8NCQ7 364 aaPredicted RBP17.15■□□□□ 0.34
SNRPF-203ENST00000551316 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
SNRPF-203ENST00000551316 APBA2Q99767 749 aa17.15■□□□□ 0.34
SNRPF-203ENST00000551316 PBX4Q9BYU1 374 aa17.15■□□□□ 0.34
SNRPF-203ENST00000551316 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
SNRPF-203ENST00000551316 RGS3P49796 1198 aa17.14■□□□□ 0.33
SNRPF-203ENST00000551316 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
SNRPF-203ENST00000551316 Q3C1V9 767 aa17.14■□□□□ 0.33
SNRPF-203ENST00000551316 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
SNRPF-203ENST00000551316 LPAR1Q92633 364 aa17.14■□□□□ 0.33
SNRPF-203ENST00000551316 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
SNRPF-203ENST00000551316 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
SNRPF-203ENST00000551316 A0A0G2JMZ2 1700 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 MAP3K10Q02779 954 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 SPP2Q13103 211 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 CCDC30Q5VVM6 783 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 DDX4Q9NQI0 724 aaKnown RBP17.13■□□□□ 0.33
SNRPF-203ENST00000551316 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 MAST3O60307 1309 aa17.13■□□□□ 0.33
SNRPF-203ENST00000551316 PRRC2BQ5JSZ5 2229 aaKnown RBP17.12■□□□□ 0.33
SNRPF-203ENST00000551316 IGFBP4P22692 258 aa17.12■□□□□ 0.33
SNRPF-203ENST00000551316 PRDX5P30044 214 aa17.12■□□□□ 0.33
SNRPF-203ENST00000551316 P2RX7Q99572 595 aaKnown RBP17.12■□□□□ 0.33
SNRPF-203ENST00000551316 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.11■□□□□ 0.33
SNRPF-203ENST00000551316 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.11■□□□□ 0.33
SNRPF-203ENST00000551316 CTNND1O60716 968 aaKnown RBP17.11■□□□□ 0.33
SNRPF-203ENST00000551316 GPR37L1O60883 481 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 RGS2P41220 211 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 TLE2Q04725 743 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 USP40Q9NVE5 1235 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 RBPJLQ9UBG7 517 aa17.11■□□□□ 0.33
SNRPF-203ENST00000551316 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
SNRPF-203ENST00000551316 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
SNRPF-203ENST00000551316 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
SNRPF-203ENST00000551316 CNGA1P29973 690 aa17.1■□□□□ 0.33
SNRPF-203ENST00000551316 CYP2C19P33261 490 aa17.1■□□□□ 0.33
SNRPF-203ENST00000551316 VPS37DQ86XT2 251 aa17.1■□□□□ 0.33
SNRPF-203ENST00000551316 VGLL2Q8N8G2 317 aa17.1■□□□□ 0.33
SNRPF-203ENST00000551316 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNRPF-203ENST00000551316 CD320Q9NPF0 282 aa17.1■□□□□ 0.33
SNRPF-203ENST00000551316 NHLH1Q02575 133 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 CCDC57Q2TAC2 916 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
SNRPF-203ENST00000551316 MICALL1Q8N3F8 863 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 IFT57Q9NWB7 429 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 UTYO14607 1347 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 ZNF318Q5VUA4 2279 aa17.09■□□□□ 0.33
SNRPF-203ENST00000551316 TRIOO75962 3097 aa17.08■□□□□ 0.33
SNRPF-203ENST00000551316 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.33
SNRPF-203ENST00000551316 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.33
SNRPF-203ENST00000551316 COL4A4P53420 1690 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms