RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
RAB5C-206ENST00000550406 FOXP4Q8IVH2 680 aaPredicted RBP15.59■□□□□ 0.09
RAB5C-206ENST00000550406 DYNLL2Q96FJ2 89 aa15.59■□□□□ 0.09
RAB5C-206ENST00000550406 DSCC1Q9BVC3 393 aa15.59■□□□□ 0.09
RAB5C-206ENST00000550406 EHD4Q9H223 541 aa15.59■□□□□ 0.09
RAB5C-206ENST00000550406 GBA2Q9HCG7 927 aaPredicted RBP15.59■□□□□ 0.09
RAB5C-206ENST00000550406 ZNF112Q9UJU3 913 aa15.59■□□□□ 0.09
RAB5C-206ENST00000550406 MINDY4BA8MYZ0 360 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 UBE2Q2LH0YL09 131 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 TDO2P48775 406 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 APLP1P51693 650 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 TTC6Q86TZ1 520 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 MAP4K1Q92918 833 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 KLRG1Q96E93 195 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 NAPBQ9H115 298 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 ARPP21Q9UBL0 812 aaPredicted RBP15.58■□□□□ 0.08
RAB5C-206ENST00000550406 ANGEL1Q9UNK9 670 aaKnown RBP15.58■□□□□ 0.08
RAB5C-206ENST00000550406 PHIPQ8WWQ0 1821 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 ZMYM6O95789 1325 aa15.58■□□□□ 0.08
RAB5C-206ENST00000550406 DOCK1Q14185 1865 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 HLA-DOAP06340 250 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 SHMT1P34896 483 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 NF2P35240 595 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 JAG1P78504 1218 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 LDLRAD1Q5T700 205 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.57■□□□□ 0.08
RAB5C-206ENST00000550406 SLC44A5Q8NCS7 719 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.57■□□□□ 0.08
RAB5C-206ENST00000550406 ZNF341Q9BYN7 854 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 NBPF3Q9H094 633 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.57■□□□□ 0.08
RAB5C-206ENST00000550406 INCENPQ9NQS7 918 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 SERPINB13Q9UIV8 391 aa15.57■□□□□ 0.08
RAB5C-206ENST00000550406 INPP5BP32019 993 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 CTDSPL2Q05D32 466 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 PPARAQ07869 468 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 SHROOM1Q2M3G4 852 aaPredicted RBP15.56■□□□□ 0.08
RAB5C-206ENST00000550406 DCAF15Q66K64 600 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 TATDN1Q6P1N9 297 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 C2orf69Q8N8R5 385 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 HOOK2Q96ED9 719 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
RAB5C-206ENST00000550406 ANAPC4Q9UJX5 808 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 TLL2Q9Y6L7 1015 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 ROBO3Q96MS0 1386 aa15.56■□□□□ 0.08
RAB5C-206ENST00000550406 GREB1LQ9C091 1923 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-206ENST00000550406 PPP1R12BO60237 982 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-206ENST00000550406 CDK8P49336 464 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 HAND2P61296 217 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 FKBP1BP68106 108 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 HTRA3P83110 453 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 TTLL12Q14166 644 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-206ENST00000550406 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 CASC1Q6TDU7 716 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 C16orf86Q6ZW13 317 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 ARMC9Q7Z3E5 817 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 SAPCD2Q86UD0 394 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 STK11IPQ8N1F8 1099 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 CRACR2BQ8N4Y2 399 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-206ENST00000550406 NKX2-3Q8TAU0 364 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 CLMNQ96JQ2 1002 aa15.55■□□□□ 0.08
RAB5C-206ENST00000550406 SEC24BO95487 1268 aa15.54■□□□□ 0.08
RAB5C-206ENST00000550406 IREB2P48200 963 aaKnown RBP15.54■□□□□ 0.08
RAB5C-206ENST00000550406 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
RAB5C-206ENST00000550406 ZKSCAN4Q969J2 545 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-206ENST00000550406 WRNIP1Q96S55 665 aa15.54■□□□□ 0.08
RAB5C-206ENST00000550406 ANO2Q9NQ90 1003 aa15.54■□□□□ 0.08
RAB5C-206ENST00000550406 CREBZFQ9NS37 354 aa15.54■□□□□ 0.08
RAB5C-206ENST00000550406 RBM8AQ9Y5S9 174 aaKnown RBP15.54■□□□□ 0.08
RAB5C-206ENST00000550406 TAF6LQ9Y6J9 622 aa15.54■□□□□ 0.08
RAB5C-206ENST00000550406 FGRP09769 529 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 HUNKP57058 714 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 VGLL4Q14135 290 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 NECTIN1Q15223 517 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 KIAA1211Q6ZU35 1233 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 AMOTL1Q8IY63 956 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-206ENST00000550406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAB5C-206ENST00000550406 SNCAIPQ9Y6H5 919 aa15.53■□□□□ 0.08
RAB5C-206ENST00000550406 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-206ENST00000550406 CTNND1O60716 968 aaKnown RBP15.52■□□□□ 0.08
RAB5C-206ENST00000550406 CYP21A2P08686 494 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 HSPA6P17066 643 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 RASA1P20936 1047 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 CAP2P40123 477 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 NOL9Q5SY16 702 aaKnown RBP15.52■□□□□ 0.08
RAB5C-206ENST00000550406 ANKRD13AQ8IZ07 590 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 SWAP70Q9UH65 585 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 CTNNA3Q9UI47 895 aa15.52■□□□□ 0.08
RAB5C-206ENST00000550406 PTPRFP10586 1907 aa15.51■□□□□ 0.07
RAB5C-206ENST00000550406 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
RAB5C-206ENST00000550406 ZNF213O14771 459 aa15.51■□□□□ 0.07
RAB5C-206ENST00000550406 PRDM1O75626 825 aa15.51■□□□□ 0.07
RAB5C-206ENST00000550406 GDF11O95390 407 aa15.51■□□□□ 0.07
RAB5C-206ENST00000550406 AKR1B1P15121 316 aa15.51■□□□□ 0.07
RAB5C-206ENST00000550406 GUCY1A2P33402 732 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms