RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 SNCAIPQ9Y6H5 919 aa11.59□□□□□ -0.55
USP15-208ENST00000548524 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 CYP7A1P22680 504 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 INPP5BP32019 993 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 GTF2A2P52657 109 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 ERO1BQ86YB8 467 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
USP15-208ENST00000548524 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 ECM29Q5VYK3 1845 aa11.58□□□□□ -0.56
USP15-208ENST00000548524 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
USP15-208ENST00000548524 MAP3K12Q12852 859 aa11.57□□□□□ -0.56
USP15-208ENST00000548524 DGKZQ13574 1117 aa11.57□□□□□ -0.56
USP15-208ENST00000548524 TTF1Q15361 905 aaPredicted RBP11.57□□□□□ -0.56
USP15-208ENST00000548524 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
USP15-208ENST00000548524 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
USP15-208ENST00000548524 DNAJC2Q99543 621 aaKnown RBP11.57□□□□□ -0.56
USP15-208ENST00000548524 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
USP15-208ENST00000548524 ZNF112Q9UJU3 913 aa11.57□□□□□ -0.56
USP15-208ENST00000548524 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 CCL15-CCL14A0A0B4J2E2 113 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
USP15-208ENST00000548524 GPR25O00155 361 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 IGF2BP3O00425 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP15-208ENST00000548524 PPP4CP60510 307 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 PPIL2Q13356 520 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 SNAPC2Q13487 334 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 CCL15Q16663 113 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 MAGEB6Q8N7X4 407 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 MCOLN1Q9GZU1 580 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
USP15-208ENST00000548524 ANTXR1Q9H6X2 564 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 PICK1Q9NRD5 415 aa11.56□□□□□ -0.56
USP15-208ENST00000548524 MYH13Q9UKX3 1938 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 IRF6O14896 467 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 SMARCA5O60264 1052 aaPredicted RBP11.55□□□□□ -0.56
USP15-208ENST00000548524 FKTNO75072 461 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 CETPP11597 493 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 PPATQ06203 517 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 NOL9Q5SY16 702 aaKnown RBP11.55□□□□□ -0.56
USP15-208ENST00000548524 ADGRA1Q86SQ6 560 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 MAPKAPK5Q8IW41 473 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP15-208ENST00000548524 TGFBRAP1Q8WUH2 860 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 ZNF296Q8WUU4 475 aaPredicted RBP11.55□□□□□ -0.56
USP15-208ENST00000548524 BRI3BPQ8WY22 251 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 ABHD8Q96I13 439 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 PTPN18Q99952 460 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 CFHR5Q9BXR6 569 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 BOLA2Q9H3K6 86 aa11.55□□□□□ -0.56
USP15-208ENST00000548524 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP15-208ENST00000548524 PHF20L1A8MW92 1017 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 GOLIM4O00461 696 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 DYNLL1P63167 89 aaKnown RBP11.54□□□□□ -0.56
USP15-208ENST00000548524 NOM1Q5C9Z4 860 aaKnown RBP11.54□□□□□ -0.56
USP15-208ENST00000548524 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
USP15-208ENST00000548524 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
USP15-208ENST00000548524 CERS3Q8IU89 383 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 SCYL3Q8IZE3 742 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 CRBNQ96SW2 442 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 R3HDMLQ9H3Y0 253 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 DCTPP1Q9H773 170 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
USP15-208ENST00000548524 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 TBC1D12O60347 775 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
USP15-208ENST00000548524 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 ATP5JP18859 108 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 USP5P45974 858 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 MAP3K10Q02779 954 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 CRHR2Q13324 411 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 TAF1CQ15572 869 aaPredicted RBP11.53□□□□□ -0.56
USP15-208ENST00000548524 SLC9C2Q5TAH2 1124 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
USP15-208ENST00000548524 ZFYVE28Q9HCC9 887 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 PI4KBQ9UBF8 816 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 PCDHB15Q9Y5E8 787 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 FLT1P17948 1338 aa11.53□□□□□ -0.56
USP15-208ENST00000548524 CCDC85CA6NKD9 419 aa11.52□□□□□ -0.57
USP15-208ENST00000548524 BTBD19C9JJ37 291 aa11.52□□□□□ -0.57
USP15-208ENST00000548524 HLA-DOAP06340 250 aa11.52□□□□□ -0.57
USP15-208ENST00000548524 FAM43AQ8N2R8 423 aa11.52□□□□□ -0.57
USP15-208ENST00000548524 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
USP15-208ENST00000548524 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
USP15-208ENST00000548524 SAP30BPQ9UHR5 308 aaKnown RBP11.52□□□□□ -0.57
USP15-208ENST00000548524 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.57
USP15-208ENST00000548524 ZHX2Q9Y6X8 837 aa11.52□□□□□ -0.57
USP15-208ENST00000548524 MAGEB6P1A0A0J9YX57 407 aa11.51□□□□□ -0.57
USP15-208ENST00000548524 CXCL11O14625 94 aa11.51□□□□□ -0.57
USP15-208ENST00000548524 PDE6AP16499 860 aa11.51□□□□□ -0.57
USP15-208ENST00000548524 PTPRAP18433 802 aa11.51□□□□□ -0.57
USP15-208ENST00000548524 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
USP15-208ENST00000548524 HAUS7Q99871 368 aa11.51□□□□□ -0.57
USP15-208ENST00000548524 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.572e-14■□□□□ 10.9
USP15-208ENST00000548524 ZCCHC17Q9NP64 241 aaKnown RBP11.51□□□□□ -0.57
USP15-208ENST00000548524 ECHDC1Q9NTX5 307 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms