RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SH3RF3Q8TEJ3 882 aaPredicted RBP24.37■■□□□ 1.49
RITA1-201ENST00000548278 PARP3Q9Y6F1 533 aa24.37■■□□□ 1.49
RITA1-201ENST00000548278 MROH7-TTC4A0A0A0MT08 1334 aa24.37■■□□□ 1.49
RITA1-201ENST00000548278 COL11A2P13942 1736 aaPredicted RBP24.37■■□□□ 1.49
RITA1-201ENST00000548278 DLEC1Q9Y238 1755 aa24.36■■□□□ 1.49
RITA1-201ENST00000548278 PDE6BP35913 854 aa24.36■■□□□ 1.49
RITA1-201ENST00000548278 KIF23Q02241 960 aaPredicted RBP24.36■■□□□ 1.49
RITA1-201ENST00000548278 RGS17Q9UGC6 210 aaPredicted RBP24.36■■□□□ 1.49
RITA1-201ENST00000548278 KIF28PB7ZC32 967 aa24.36■■□□□ 1.49
RITA1-201ENST00000548278 BAG3O95817 575 aa24.36■■□□□ 1.49
RITA1-201ENST00000548278 SSRP1Q08945 709 aaKnown RBP24.36■■□□□ 1.49
RITA1-201ENST00000548278 MCM9Q9NXL9 1143 aa24.36■■□□□ 1.49
RITA1-201ENST00000548278 SLC3A2P08195 630 aaKnown RBP24.35■■□□□ 1.49
RITA1-201ENST00000548278 IQCA1Q86XH1 822 aa24.35■■□□□ 1.49
RITA1-201ENST00000548278 FANCBQ8NB91 859 aa24.35■■□□□ 1.49
RITA1-201ENST00000548278 SLC26A6Q9BXS9 759 aa24.35■■□□□ 1.49
RITA1-201ENST00000548278 RTFDC1Q9BY42 306 aaPredicted RBP24.35■■□□□ 1.49
RITA1-201ENST00000548278 RTEL1Q9NZ71 1219 aa24.35■■□□□ 1.49
RITA1-201ENST00000548278 CCDC196A0A1B0GTZ2 297 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 USP17L8P0C7I0 530 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 MSL1Q68DK7 614 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 KRT40Q6A162 431 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 FAM205AQ6ZU69 1335 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 POLR3DP05423 398 aaPredicted RBP24.34■■□□□ 1.49
RITA1-201ENST00000548278 ALDH1B1P30837 517 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 NBPF11Q86T75 865 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 FUCA2Q9BTY2 467 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 DACT1Q9NYF0 836 aa24.34■■□□□ 1.49
RITA1-201ENST00000548278 UBE2Q2LH0YL09 131 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 USP5P45974 858 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 MFSD14BQ5SR56 506 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 C12orf60Q5U649 245 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 MYSM1Q5VVJ2 828 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 BICD2Q8TD16 824 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 TBC1D22AQ8WUA7 517 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 NUP133Q8WUM0 1156 aa24.33■■□□□ 1.49
RITA1-201ENST00000548278 PPP2R5BQ15173 497 aa24.33■■□□□ 1.48
RITA1-201ENST00000548278 IFIT1BQ5T764 474 aaKnown RBP24.33■■□□□ 1.48
RITA1-201ENST00000548278 CRACR2BQ8N4Y2 399 aaPredicted RBP24.33■■□□□ 1.48
RITA1-201ENST00000548278 MASTLQ96GX5 879 aa24.33■■□□□ 1.48
RITA1-201ENST00000548278 PPP1R9BQ96SB3 815 aa24.33■■□□□ 1.48
RITA1-201ENST00000548278 NOL10Q9BSC4 688 aaKnown RBP24.33■■□□□ 1.48
RITA1-201ENST00000548278 NUP62CLQ9H1M0 184 aa24.33■■□□□ 1.48
RITA1-201ENST00000548278 DDX19AQ9NUU7 478 aaKnown RBP24.33■■□□□ 1.48
RITA1-201ENST00000548278 PDE4BQ07343 736 aa24.32■■□□□ 1.48
RITA1-201ENST00000548278 OLFM4Q6UX06 510 aa24.32■■□□□ 1.48
RITA1-201ENST00000548278 RNF214Q8ND24 703 aa24.32■■□□□ 1.48
RITA1-201ENST00000548278 WASF1Q92558 559 aa24.32■■□□□ 1.48
RITA1-201ENST00000548278 GPR75-ASB3A0A0A6YYF3 556 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 CCDC173Q0VFZ6 552 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 POTEAQ6S8J7 498 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 CERS3Q8IU89 383 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 MPNDQ8N594 471 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 ANP32BQ92688 251 aaKnown RBP24.31■■□□□ 1.48
RITA1-201ENST00000548278 COA1Q9GZY4 146 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 POLR3EQ9NVU0 708 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 CDK5RAP2Q96SN8 1893 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 NAV1Q8NEY1 1877 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 NR1I2O75469 434 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 GUCY1A2P33402 732 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 TRIM22Q8IYM9 498 aa24.31■■□□□ 1.48
RITA1-201ENST00000548278 FAM163AQ96GL9 167 aaPredicted RBP24.31■■□□□ 1.48
RITA1-201ENST00000548278 RIMBP2O15034 1052 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 BTDP43251 543 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 CATIPQ7Z7H3 387 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 TGFBRAP1Q8WUH2 860 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 CLIC4Q9Y696 253 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 ROBO3Q96MS0 1386 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 TROAPQ12815 778 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 TRIM29Q14134 588 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 FAM47AQ5JRC9 791 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 LINC00301Q8NCQ3 95 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 CLSTN2Q9H4D0 955 aa24.3■■□□□ 1.48
RITA1-201ENST00000548278 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
RITA1-201ENST00000548278 CMTR1Q8N1G2 835 aaKnown RBP24.29■■□□□ 1.48
RITA1-201ENST00000548278 GAKO14976 1311 aa24.29■■□□□ 1.48
RITA1-201ENST00000548278 NMT2O60551 498 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 DEXIO95424 95 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 YEATS4O95619 227 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 U2AF2P26368 475 aaKnown RBP eCLIP24.28■■□□□ 1.48
RITA1-201ENST00000548278 GTF2IP78347 998 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 MAP3K11Q16584 847 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 SLC4A8Q2Y0W8 1093 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 DDAH1O94760 285 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 ME1P48163 572 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 NT5C2P49902 561 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 CAMK4Q16566 473 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
RITA1-201ENST00000548278 RBM43Q6ZSC3 357 aaKnown RBP24.28■■□□□ 1.48
RITA1-201ENST00000548278 CCAR1Q8IX12 1150 aaKnown RBP24.28■■□□□ 1.48
RITA1-201ENST00000548278 SLF2Q8IX21 1173 aa24.28■■□□□ 1.48
RITA1-201ENST00000548278 ZC3H12CQ9C0D7 883 aaKnown RBP24.28■■□□□ 1.48
RITA1-201ENST00000548278 FUT2Q10981 343 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 CCDC82Q8N4S0 544 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 DYNLL2Q96FJ2 89 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 CAMKK2Q96RR4 588 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 TNMDQ9H2S6 317 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 GOLPH3LQ9H4A5 285 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 PCDHA7Q9UN72 937 aa24.27■■□□□ 1.48
RITA1-201ENST00000548278 MYH6P13533 1939 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms