RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 KIF23Q02241 960 aaPredicted RBP13.23□□□□□ -0.29
DDB1-224ENST00000545894 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 C2CD5Q86YS7 1000 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 MB21D2Q8IYB1 491 aaPredicted RBP13.23□□□□□ -0.29
DDB1-224ENST00000545894 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 ANKRD31Q8N7Z5 1873 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 KIF28PB7ZC32 967 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 FOXP2O15409 715 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDB1-224ENST00000545894 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 NCOA7Q8NI08 942 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
DDB1-224ENST00000545894 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDB1-224ENST00000545894 LAMB2P55268 1798 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 SRGNP10124 158 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 LMOD1P29536 600 aaPredicted RBP13.22□□□□□ -0.29
DDB1-224ENST00000545894 RALYLQ86SE5 291 aaKnown RBP13.22□□□□□ -0.29
DDB1-224ENST00000545894 ZNF446Q9NWS9 450 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
DDB1-224ENST00000545894 H0YIN7 160 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 FGAP02671 866 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 ITGA6P23229 1130 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 ANTXR2P58335 489 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 ETF1P62495 437 aaKnown RBP13.21□□□□□ -0.29
DDB1-224ENST00000545894 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
DDB1-224ENST00000545894 SLC39A14Q15043 492 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
DDB1-224ENST00000545894 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.29
DDB1-224ENST00000545894 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.3
DDB1-224ENST00000545894 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.3
DDB1-224ENST00000545894 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.3
DDB1-224ENST00000545894 CBFA2T2O43439 604 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 WDHD1O75717 1129 aaPredicted RBP13.2□□□□□ -0.3
DDB1-224ENST00000545894 NPR1P16066 1061 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 DPEP1P16444 411 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 KCNA3P22001 575 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
DDB1-224ENST00000545894 SYKP43405 635 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 TGFB2P61812 414 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 FAM193AP78312 1265 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
DDB1-224ENST00000545894 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
DDB1-224ENST00000545894 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 APPBP2Q92624 585 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
DDB1-224ENST00000545894 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
DDB1-224ENST00000545894 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
DDB1-224ENST00000545894 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 ZNF213O14771 459 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
DDB1-224ENST00000545894 UBASH3AP57075 661 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 MYL5Q02045 173 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 LRRN4CLQ8ND94 238 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 CELF1Q92879 486 aaKnown RBP13.19□□□□□ -0.3
DDB1-224ENST00000545894 ZNF622Q969S3 477 aaKnown RBP eCLIP13.19□□□□□ -0.3
DDB1-224ENST00000545894 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 COL4A1P02462 1669 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 PPP6R2O75170 966 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 SERPINC1P01008 464 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 STYK1Q6J9G0 422 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
DDB1-224ENST00000545894 MYO1BO43795 1136 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 CLCN6P51797 869 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 ARHGAP29Q52LW3 1261 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 CRAMP1Q96RY5 1269 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
DDB1-224ENST00000545894 TMX1Q9H3N1 280 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
DDB1-224ENST00000545894 ADORA1P30542 326 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 GRAPQ13588 217 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 SHC4Q6S5L8 630 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 SLC51AQ86UW1 340 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
DDB1-224ENST00000545894 DPF2Q92785 391 aa13.18□□□□□ -0.3
DDB1-224ENST00000545894 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
DDB1-224ENST00000545894 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms