RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 FAM196BA6NMK8 535 aa11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 PATL2C9JE40 543 aaKnown RBP11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 IGSF3O75054 1194 aa11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 SHROOM1Q2M3G4 852 aaPredicted RBP11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 NBPF12Q5TAG4 269 aaPredicted RBP11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 OSBPL5Q9H0X9 879 aaPredicted RBP11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
CDK2AP1-206ENST00000544658 ATRNL1Q5VV63 1379 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 USP17L21D6R901 530 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 HIP1O00291 1037 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 FGAP02671 866 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 USP5P45974 858 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 MMP14P50281 582 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 CRNKL1Q9BZJ0 848 aaKnown RBP11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 DNAJC18Q9H819 358 aa11.32□□□□□ -0.6
CDK2AP1-206ENST00000544658 LAMB1P07942 1786 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 HAND2P61296 217 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 JAG1P78504 1218 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 LRRFIP1Q32MZ4 808 aaKnown RBP11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 TMED8Q6PL24 325 aaPredicted RBP11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 MOB2Q70IA6 237 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 PNMA8AQ86V59 439 aaPredicted RBP11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 SLC44A5Q8NCS7 719 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 NOL10Q9BSC4 688 aaKnown RBP11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 RAD50Q92878 1312 aa11.31□□□□□ -0.6
CDK2AP1-206ENST00000544658 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 ENTPD3O75355 529 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 APPP05067 770 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 ALX1Q15699 326 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 MIGA2Q7L4E1 593 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 ZC3H15Q8WU90 426 aaKnown RBP11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 ANO2Q9NQ90 1003 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 RBM8AQ9Y5S9 174 aaKnown RBP11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
CDK2AP1-206ENST00000544658 PAPPA2Q9BXP8 1791 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 MYO1BO43795 1136 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 MFAP1P55081 439 aaKnown RBP11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 PRKG1Q13976 671 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
CDK2AP1-206ENST00000544658 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 CYP21A2P08686 494 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 GNAT2P19087 354 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 TDO2P48775 406 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 GABPAQ06546 454 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 CST9Q5W186 159 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
CDK2AP1-206ENST00000544658 MYH8P13535 1937 aa11.27□□□□□ -0.6
CDK2AP1-206ENST00000544658 SLC27A2O14975 620 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 USP2O75604 605 aaPredicted RBP11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 PRDM1O75626 825 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 SHMT1P34896 483 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 PPARAQ07869 468 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 CREB3L3Q68CJ9 461 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 CDC37L1Q7L3B6 337 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 CSRNP1Q96S65 589 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 NAPBQ9H115 298 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 PASKQ96RG2 1323 aa11.27□□□□□ -0.61
CDK2AP1-206ENST00000544658 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
CDK2AP1-206ENST00000544658 PHF20L1A8MW92 1017 aa11.26□□□□□ -0.61
CDK2AP1-206ENST00000544658 GSE1Q14687 1217 aa11.26□□□□□ -0.61
CDK2AP1-206ENST00000544658 ADCK5Q3MIX3 580 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms