RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CLIC4Q9Y696 253 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 TULP2O00295 520 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 BBOX1O75936 387 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 SRGNP10124 158 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 ME1P48163 572 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 IMMTQ16891 758 aaKnown RBP17.36■□□□□ 0.37
CHFR-223ENST00000544268 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
CHFR-223ENST00000544268 KRT222Q8N1A0 295 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 STK11IPQ8N1F8 1099 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 ZNF274Q96GC6 653 aaPredicted RBP17.36■□□□□ 0.37
CHFR-223ENST00000544268 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
CHFR-223ENST00000544268 RCOR1Q9UKL0 485 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
CHFR-223ENST00000544268 A0A1B0GVL5 298 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 CYB5R4Q7L1T6 521 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 CCDC186Q7Z3E2 898 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 LRP2BPQ9P2M1 347 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 APPP05067 770 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 TRIM5Q9C035 493 aa17.35■□□□□ 0.37
CHFR-223ENST00000544268 ARID5BQ14865 1188 aa17.34■□□□□ 0.37
CHFR-223ENST00000544268 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
CHFR-223ENST00000544268 MYL10Q9BUA6 226 aa17.34■□□□□ 0.37
CHFR-223ENST00000544268 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
CHFR-223ENST00000544268 PAXBP1Q9Y5B6 917 aa17.34■□□□□ 0.37
CHFR-223ENST00000544268 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
CHFR-223ENST00000544268 ZNF213O14771 459 aa17.33■□□□□ 0.37
CHFR-223ENST00000544268 PDE6BP35913 854 aa17.33■□□□□ 0.37
CHFR-223ENST00000544268 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.37
CHFR-223ENST00000544268 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.37
CHFR-223ENST00000544268 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.37
CHFR-223ENST00000544268 SEMA3EO15041 775 aa17.33■□□□□ 0.36
CHFR-223ENST00000544268 NPR1P16066 1061 aa17.33■□□□□ 0.36
CHFR-223ENST00000544268 DRC7Q8IY82 874 aa17.33■□□□□ 0.36
CHFR-223ENST00000544268 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
CHFR-223ENST00000544268 TACC3Q9Y6A5 838 aa17.33■□□□□ 0.36
CHFR-223ENST00000544268 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 PPEF1O14829 653 aaPredicted RBP17.32■□□□□ 0.36
CHFR-223ENST00000544268 UFL1O94874 794 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 ENGASEQ8NFI3 743 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 FAM53CQ9NYF3 392 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 B4E1Z4 1266 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 ZNF75DP51815 510 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 PHKBQ93100 1093 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 TSPYL1Q9H0U9 437 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 GGA1Q9UJY5 639 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 JAG2Q9Y219 1238 aa17.32■□□□□ 0.36
CHFR-223ENST00000544268 NDUFA8P51970 172 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 IQCB1Q15051 598 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
CHFR-223ENST00000544268 NCOA7Q8NI08 942 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
CHFR-223ENST00000544268 STRBPQ96SI9 672 aaKnown RBP17.31■□□□□ 0.36
CHFR-223ENST00000544268 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 NEDD4P46934 1319 aa17.31■□□□□ 0.36
CHFR-223ENST00000544268 MYH15Q9Y2K3 1946 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 MBD4O95243 580 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 ATP2B4P23634 1241 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 CDC27P30260 824 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 EVCP57679 992 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 ADGRA1Q86SQ6 560 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 CCDC112Q8NEF3 446 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 CTDSPL2Q05D32 466 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
CHFR-223ENST00000544268 ZNF397Q8NF99 534 aaPredicted RBP17.3■□□□□ 0.36
CHFR-223ENST00000544268 TBC1D16Q8TBP0 767 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 MASTLQ96GX5 879 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 ARMT1Q9H993 441 aa17.3■□□□□ 0.36
CHFR-223ENST00000544268 PDS5AQ29RF7 1337 aaKnown RBP17.3■□□□□ 0.36
CHFR-223ENST00000544268 PRKAB2O43741 272 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 CAPN2P17655 700 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 CYP7A1P22680 504 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 TMC4Q7Z404 712 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 ZNF384Q8TF68 577 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 CPLX1O14810 134 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 TNNT1P13805 278 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 MARCKSP29966 332 aaPredicted RBP17.29■□□□□ 0.36
CHFR-223ENST00000544268 ALDH1B1P30837 517 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
CHFR-223ENST00000544268 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 ZNF804AQ7Z570 1209 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
CHFR-223ENST00000544268 FBXO18Q8NFZ0 1043 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms