RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MBD4O95243 580 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
UBC-208ENST00000540700 SP3Q02447 781 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 SUPT20HL1Q3ZLR7 823 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 NBPF12Q5TAG4 269 aaPredicted RBP20.11■□□□□ 0.81
UBC-208ENST00000540700 ZSCAN25Q6NSZ9 544 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 CDAN1Q8IWY9 1227 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 ZFPM1Q8IX07 1006 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 TMEM106CQ9BVX2 250 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 ARMT1Q9H993 441 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 FAM198AQ9UFP1 575 aa20.11■□□□□ 0.81
UBC-208ENST00000540700 MAGEB6P1A0A0J9YX57 407 aa20.1■□□□□ 0.81
UBC-208ENST00000540700 MYO1BO43795 1136 aa20.1■□□□□ 0.81
UBC-208ENST00000540700 IREB2P48200 963 aaKnown RBP20.1■□□□□ 0.81
UBC-208ENST00000540700 CAP1Q01518 475 aa20.1■□□□□ 0.81
UBC-208ENST00000540700 TMED8Q6PL24 325 aaPredicted RBP20.1■□□□□ 0.81
UBC-208ENST00000540700 PTPN18Q99952 460 aa20.1■□□□□ 0.81
UBC-208ENST00000540700 PPP2R3BQ9Y5P8 575 aa20.1■□□□□ 0.81
UBC-208ENST00000540700 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
UBC-208ENST00000540700 TRIOBPQ9H2D6 2365 aa20.09■□□□□ 0.81
UBC-208ENST00000540700 TCP10L2B9ZVM9 353 aa20.09■□□□□ 0.81
UBC-208ENST00000540700 PRKAB2O43741 272 aa20.09■□□□□ 0.81
UBC-208ENST00000540700 MYCP01106 439 aaPredicted RBP20.09■□□□□ 0.81
UBC-208ENST00000540700 CHMLP26374 656 aa20.09■□□□□ 0.81
UBC-208ENST00000540700 ZNF589Q86UQ0 364 aaPredicted RBP20.09■□□□□ 0.81
UBC-208ENST00000540700 COLQQ9Y215 455 aaPredicted RBP20.09■□□□□ 0.81
UBC-208ENST00000540700 FOXP2O15409 715 aa20.08■□□□□ 0.81
UBC-208ENST00000540700 GPAA1O43292 621 aa20.08■□□□□ 0.81
UBC-208ENST00000540700 USP2O75604 605 aaPredicted RBP20.08■□□□□ 0.81
UBC-208ENST00000540700 TEX11Q8IYF3 940 aa20.08■□□□□ 0.81
UBC-208ENST00000540700 STRBPQ96SI9 672 aaKnown RBP20.08■□□□□ 0.81
UBC-208ENST00000540700 IDI2Q9BXS1 227 aa20.08■□□□□ 0.81
UBC-208ENST00000540700 ELP3Q9H9T3 547 aa20.08■□□□□ 0.81
UBC-208ENST00000540700 CDK5RAP2Q96SN8 1893 aa20.07■□□□□ 0.8
UBC-208ENST00000540700 BAG3O95817 575 aa20.07■□□□□ 0.8
UBC-208ENST00000540700 CWC27Q6UX04 472 aaKnown RBP20.07■□□□□ 0.8
UBC-208ENST00000540700 ANKRD13AQ8IZ07 590 aa20.07■□□□□ 0.8
UBC-208ENST00000540700 TGFBRAP1Q8WUH2 860 aa20.07■□□□□ 0.8
UBC-208ENST00000540700 SDR42E1Q8WUS8 393 aa20.07■□□□□ 0.8
UBC-208ENST00000540700 ZNF333Q96JL9 665 aa20.07■□□□□ 0.8
UBC-208ENST00000540700 TCP10Q12799 353 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 PICALMQ13492 652 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 RASA3Q14644 834 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 SLC4A8Q2Y0W8 1093 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 SH3BP5LQ7L8J4 393 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 TICAM2Q86XR7 235 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 MAPKAPK5Q8IW41 473 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 TEPSINQ96N21 525 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 TMEM39BQ9GZU3 492 aa20.06■□□□□ 0.8
UBC-208ENST00000540700 FLT1P17948 1338 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 DDX60LQ5H9U9 1706 aaKnown RBP20.05■□□□□ 0.8
UBC-208ENST00000540700 FOCADQ5VW36 1801 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 UNCXA6NJT0 531 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 SLURP2P0DP57 97 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 EVX2Q03828 476 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 LRRFIP1Q32MZ4 808 aaKnown RBP20.05■□□□□ 0.8
UBC-208ENST00000540700 SLC9C1Q4G0N8 1177 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 OPTNQ96CV9 577 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 NOL10Q9BSC4 688 aaKnown RBP20.05■□□□□ 0.8
UBC-208ENST00000540700 HELLSQ9NRZ9 838 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 DIAPH3Q9NSV4 1193 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 PTCH2Q9Y6C5 1203 aa20.05■□□□□ 0.8
UBC-208ENST00000540700 TESPA1A2RU30 521 aaPredicted RBP20.04■□□□□ 0.8
UBC-208ENST00000540700 PLCG2P16885 1265 aa20.04■□□□□ 0.8
UBC-208ENST00000540700 MCMDC2Q4G0Z9 681 aa20.04■□□□□ 0.8
UBC-208ENST00000540700 FKBP1CQ5VVH2 108 aa20.04■□□□□ 0.8
UBC-208ENST00000540700 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
UBC-208ENST00000540700 EPB41L4AQ9HCS5 686 aaPredicted RBP20.04■□□□□ 0.8
UBC-208ENST00000540700 DDTLA6NHG4 134 aaPredicted RBP20.03■□□□□ 0.8
UBC-208ENST00000540700 SMIM22K7EJ46 135 aa20.03■□□□□ 0.8
UBC-208ENST00000540700 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
UBC-208ENST00000540700 NBPF11Q86T75 865 aa20.03■□□□□ 0.8
UBC-208ENST00000540700 FAM83AQ86UY5 434 aa20.03■□□□□ 0.8
UBC-208ENST00000540700 OSBPL5Q9H0X9 879 aaPredicted RBP20.03■□□□□ 0.8
UBC-208ENST00000540700 TMOD2Q9NZR1 351 aa20.03■□□□□ 0.8
UBC-208ENST00000540700 GSG1L2A8MUP6 293 aa20.02■□□□□ 0.8
UBC-208ENST00000540700 HIP1O00291 1037 aa20.02■□□□□ 0.8
UBC-208ENST00000540700 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.8
UBC-208ENST00000540700 FAM151AQ8WW52 585 aa20.02■□□□□ 0.8
UBC-208ENST00000540700 BRI3BPQ8WY22 251 aa20.02■□□□□ 0.8
UBC-208ENST00000540700 MS4A4AQ96JQ5 239 aa20.02■□□□□ 0.8
UBC-208ENST00000540700 DCP1AQ9NPI6 582 aaPredicted RBP20.02■□□□□ 0.8
UBC-208ENST00000540700 SLC4A4Q9Y6R1 1079 aa20.02■□□□□ 0.8
UBC-208ENST00000540700 CCDC171Q6TFL3 1326 aa20.02■□□□□ 0.79
UBC-208ENST00000540700 ATRNL1Q5VV63 1379 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 CCL15-CCL14A0A0B4J2E2 113 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 H0YGN5 161 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 ENTPD3O75355 529 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 ARHGEF6Q15052 776 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 CCL15Q16663 113 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 CERS3Q8IU89 383 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 CRNKL1Q9BZJ0 848 aaKnown RBP20.01■□□□□ 0.79
UBC-208ENST00000540700 ZFYVE28Q9HCC9 887 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 SAP30BPQ9UHR5 308 aaKnown RBP20.01■□□□□ 0.79
UBC-208ENST00000540700 SZT2Q5T011 3432 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 SIPA1L1O43166 1804 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 NAV1Q8NEY1 1877 aa20.01■□□□□ 0.79
UBC-208ENST00000540700 RPAP1Q9BWH6 1393 aaPredicted RBP20■□□□□ 0.79
UBC-208ENST00000540700 SGSM2O43147 1006 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms