RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 NUP133Q8WUM0 1156 aa17.28■□□□□ 0.36
TSFM-207ENST00000540550 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
TSFM-207ENST00000540550 RGS17Q9UGC6 210 aaPredicted RBP17.28■□□□□ 0.36
TSFM-207ENST00000540550 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
TSFM-207ENST00000540550 ORC4O43929 436 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 PRDM1O75626 825 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 IFNAR1P17181 557 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 KIF23Q02241 960 aaPredicted RBP17.27■□□□□ 0.36
TSFM-207ENST00000540550 PDE4BQ07343 736 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
TSFM-207ENST00000540550 SEC23AQ15436 765 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 AMOTL1Q8IY63 956 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.36
TSFM-207ENST00000540550 DACT1Q9NYF0 836 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 RTEL1Q9NZ71 1219 aa17.27■□□□□ 0.36
TSFM-207ENST00000540550 SMIM22K7EJ46 135 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 IFIT1BQ5T764 474 aaKnown RBP17.27■□□□□ 0.35
TSFM-207ENST00000540550 KRT40Q6A162 431 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 AIFM3Q96NN9 605 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 TNMDQ9H2S6 317 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 MCM9Q9NXL9 1143 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 POLLQ9UGP5 575 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.27■□□□□ 0.35
TSFM-207ENST00000540550 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.35
TSFM-207ENST00000540550 POLR3DP05423 398 aaPredicted RBP17.26■□□□□ 0.35
TSFM-207ENST00000540550 NPR1P16066 1061 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 PDE6BP35913 854 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 ME1P48163 572 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 PPP2R5BQ15173 497 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 STK38Q15208 465 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 DIXDC1Q155Q3 683 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 POTEAQ6S8J7 498 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
TSFM-207ENST00000540550 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 TAOK2Q9UL54 1235 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
TSFM-207ENST00000540550 COL11A2P13942 1736 aaPredicted RBP17.26■□□□□ 0.35
TSFM-207ENST00000540550 CDK5RAP2Q96SN8 1893 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 MMP10P09238 476 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 CYP2D6P10635 497 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 SH3RF3Q8TEJ3 882 aaPredicted RBP17.25■□□□□ 0.35
TSFM-207ENST00000540550 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 CCDC192P0DO97 292 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 SRGNP10124 158 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 PPP4CP60510 307 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 SF3A1Q15459 793 aaKnown RBP17.25■□□□□ 0.35
TSFM-207ENST00000540550 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
TSFM-207ENST00000540550 SLF2Q8IX21 1173 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
TSFM-207ENST00000540550 POLR3EQ9NVU0 708 aa17.25■□□□□ 0.35
TSFM-207ENST00000540550 YEATS4O95619 227 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 CALM1P0DP23 149 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 CALM2P0DP24 149 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 CALM3P0DP25 149 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 GRIK5Q16478 980 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 CAMK4Q16566 473 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 KCNG4Q8TDN1 519 aa17.24■□□□□ 0.35
TSFM-207ENST00000540550 NR1I2O75469 434 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 DEXIO95424 95 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 NT5C2P49902 561 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 MFSD14BQ5SR56 506 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 FUCA2Q9BTY2 467 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 DDAH1O94760 285 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 PLCG2P16885 1265 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
TSFM-207ENST00000540550 SAFBQ15424 915 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSFM-207ENST00000540550 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 CRACR2BQ8N4Y2 399 aaPredicted RBP17.23■□□□□ 0.35
TSFM-207ENST00000540550 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
TSFM-207ENST00000540550 RBM28Q9NW13 759 aaKnown RBP17.23■□□□□ 0.35
TSFM-207ENST00000540550 CLIC4Q9Y696 253 aa17.23■□□□□ 0.35
TSFM-207ENST00000540550 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 BTDP43251 543 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 NBPF11Q86T75 865 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 MPNDQ8N594 471 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 LINC00301Q8NCQ3 95 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
TSFM-207ENST00000540550 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 EVX2Q03828 476 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 CCDC82Q8N4S0 544 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
TSFM-207ENST00000540550 TGFBRAP1Q8WUH2 860 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms