RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CNKSR1Q969H4 720 aa26.22■■□□□ 1.79
HOMER3-204ENST00000539827 F8W031 263 aaPredicted RBP26.22■■□□□ 1.79
HOMER3-204ENST00000539827 ZSCAN23Q3MJ62 389 aa26.22■■□□□ 1.79
HOMER3-204ENST00000539827 CPLX2Q6PUV4 134 aaKnown RBP26.22■■□□□ 1.79
HOMER3-204ENST00000539827 TMTC2Q8N394 836 aa26.22■■□□□ 1.79
HOMER3-204ENST00000539827 ZSCAN10Q96SZ4 725 aaPredicted RBP26.22■■□□□ 1.79
HOMER3-204ENST00000539827 ORC4O43929 436 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 C12orf60Q5U649 245 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 GAS2L3Q86XJ1 694 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 SLF2Q8IX21 1173 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 CERS5Q8N5B7 392 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 PHKBQ93100 1093 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 C8orf76Q96K31 380 aa26.21■■□□□ 1.79
HOMER3-204ENST00000539827 CDKL5O76039 1030 aa26.2■■□□□ 1.79
HOMER3-204ENST00000539827 FAM47AQ5JRC9 791 aa26.2■■□□□ 1.79
HOMER3-204ENST00000539827 TTC6Q86TZ1 520 aa26.2■■□□□ 1.79
HOMER3-204ENST00000539827 TEX11Q8IYF3 940 aa26.2■■□□□ 1.79
HOMER3-204ENST00000539827 DBNDD1Q9H9R9 158 aa26.2■■□□□ 1.79
HOMER3-204ENST00000539827 SAP30BPQ9UHR5 308 aaKnown RBP26.2■■□□□ 1.79
HOMER3-204ENST00000539827 UBE2HP62256 183 aa26.2■■□□□ 1.78
HOMER3-204ENST00000539827 NTRK3Q16288 839 aa26.2■■□□□ 1.78
HOMER3-204ENST00000539827 ZNF654Q8IZM8 581 aa26.2■■□□□ 1.78
HOMER3-204ENST00000539827 ENAHQ8N8S7 591 aaPredicted RBP26.2■■□□□ 1.78
HOMER3-204ENST00000539827 DYNLL2Q96FJ2 89 aa26.2■■□□□ 1.78
HOMER3-204ENST00000539827 FAM163AQ96GL9 167 aaPredicted RBP26.2■■□□□ 1.78
HOMER3-204ENST00000539827 GJB4Q9NTQ9 266 aa26.2■■□□□ 1.78
HOMER3-204ENST00000539827 PDE4BQ07343 736 aa26.19■■□□□ 1.78
HOMER3-204ENST00000539827 NUP133Q8WUM0 1156 aa26.19■■□□□ 1.78
HOMER3-204ENST00000539827 GAKO14976 1311 aa26.19■■□□□ 1.78
HOMER3-204ENST00000539827 NAV1Q8NEY1 1877 aa26.19■■□□□ 1.78
HOMER3-204ENST00000539827 RTN1Q16799 776 aa26.18■■□□□ 1.78
HOMER3-204ENST00000539827 IQCA1Q86XH1 822 aa26.18■■□□□ 1.78
HOMER3-204ENST00000539827 AIFM3Q96NN9 605 aa26.18■■□□□ 1.78
HOMER3-204ENST00000539827 TAOK2Q9UL54 1235 aa26.18■■□□□ 1.78
HOMER3-204ENST00000539827 IARSP41252 1262 aaKnown RBP26.18■■□□□ 1.78
HOMER3-204ENST00000539827 DAGLAQ9Y4D2 1042 aa26.18■■□□□ 1.78
HOMER3-204ENST00000539827 NID2Q14112 1375 aa26.17■■□□□ 1.78
HOMER3-204ENST00000539827 RHBDL3P58872 404 aa26.17■■□□□ 1.78
HOMER3-204ENST00000539827 L1TD1Q5T7N2 865 aaKnown RBP26.17■■□□□ 1.78
HOMER3-204ENST00000539827 CERS3Q8IU89 383 aa26.17■■□□□ 1.78
HOMER3-204ENST00000539827 ALG1Q9BT22 464 aa26.17■■□□□ 1.78
HOMER3-204ENST00000539827 KCNQ5Q9NR82 932 aa26.17■■□□□ 1.78
HOMER3-204ENST00000539827 CDK5RAP2Q96SN8 1893 aa26.17■■□□□ 1.78
HOMER3-204ENST00000539827 POLR3DP05423 398 aaPredicted RBP26.16■■□□□ 1.78
HOMER3-204ENST00000539827 PLCG2P16885 1265 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 IFIT1BQ5T764 474 aaKnown RBP26.16■■□□□ 1.78
HOMER3-204ENST00000539827 AMOTL1Q8IY63 956 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 C7orf43Q8WVR3 580 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 SPATA32Q96LK8 384 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 SLC26A6Q9BXS9 759 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 TTF2Q9UNY4 1162 aaKnown RBP26.16■■□□□ 1.78
HOMER3-204ENST00000539827 NMT2O60551 498 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 FBXO18Q8NFZ0 1043 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 SUGT1Q9Y2Z0 365 aa26.16■■□□□ 1.78
HOMER3-204ENST00000539827 PLCD1P51178 756 aa26.15■■□□□ 1.78
HOMER3-204ENST00000539827 ZNF445P59923 1031 aa26.15■■□□□ 1.78
HOMER3-204ENST00000539827 SSRP1Q08945 709 aaKnown RBP26.15■■□□□ 1.78
HOMER3-204ENST00000539827 LEO1Q8WVC0 666 aaPredicted RBP26.15■■□□□ 1.78
HOMER3-204ENST00000539827 SCAND2PQ9GZW5 306 aaPredicted RBP26.15■■□□□ 1.78
HOMER3-204ENST00000539827 FANCBQ8NB91 859 aa26.15■■□□□ 1.78
HOMER3-204ENST00000539827 TSPY2A6NKD2 308 aa26.14■■□□□ 1.77
HOMER3-204ENST00000539827 UBE2Q2LH0YL09 131 aa26.14■■□□□ 1.77
HOMER3-204ENST00000539827 SCNN1DP51172 638 aa26.14■■□□□ 1.77
HOMER3-204ENST00000539827 PODNQ7Z5L7 613 aa26.14■■□□□ 1.77
HOMER3-204ENST00000539827 CMTR1Q8N1G2 835 aaKnown RBP26.14■■□□□ 1.77
HOMER3-204ENST00000539827 MYH15Q9Y2K3 1946 aa26.14■■□□□ 1.77
HOMER3-204ENST00000539827 FMNL1O95466 1100 aaPredicted RBP26.13■■□□□ 1.77
HOMER3-204ENST00000539827 IFNAR1P17181 557 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 CEBPZQ03701 1054 aaKnown RBP26.13■■□□□ 1.77
HOMER3-204ENST00000539827 CCDC82Q8N4S0 544 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 ECM29Q5VYK3 1845 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 C10orf71Q711Q0 1435 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 DLEC1Q9Y238 1755 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 ELP1O95163 1332 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 FLT1P17948 1338 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 ECE2O60344 883 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 RCAN1P53805 252 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 CATIPQ7Z7H3 387 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 SLC44A5Q8NCS7 719 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 MKNK2Q9HBH9 465 aa26.13■■□□□ 1.77
HOMER3-204ENST00000539827 ROBO3Q96MS0 1386 aa26.12■■□□□ 1.77
HOMER3-204ENST00000539827 SYCE3A1L190 88 aa26.12■■□□□ 1.77
HOMER3-204ENST00000539827 C21orf2O43822 256 aa26.12■■□□□ 1.77
HOMER3-204ENST00000539827 TFAP4Q01664 338 aa26.12■■□□□ 1.77
HOMER3-204ENST00000539827 SYAP1Q96A49 352 aaPredicted RBP26.12■■□□□ 1.77
HOMER3-204ENST00000539827 STK36Q9NRP7 1315 aa26.12■■□□□ 1.77
HOMER3-204ENST00000539827 AOC3Q16853 763 aa26.11■■□□□ 1.77
HOMER3-204ENST00000539827 FTOQ9C0B1 505 aaKnown RBP eCLIP26.11■■□□□ 1.77
HOMER3-204ENST00000539827 CFAP45Q9UL16 551 aa26.11■■□□□ 1.77
HOMER3-204ENST00000539827 CCDC196A0A1B0GTZ2 297 aa26.11■■□□□ 1.77
HOMER3-204ENST00000539827 ZNF396Q96N95 335 aaPredicted RBP26.11■■□□□ 1.77
HOMER3-204ENST00000539827 GRPEL1Q9HAV7 217 aa26.11■■□□□ 1.77
HOMER3-204ENST00000539827 ISY1Q9ULR0 285 aaKnown RBP26.11■■□□□ 1.77
HOMER3-204ENST00000539827 KIF28PB7ZC32 967 aa26.1■■□□□ 1.77
HOMER3-204ENST00000539827 XRCC6P12956 609 aaKnown RBP eCLIP26.1■■□□□ 1.77
HOMER3-204ENST00000539827 GUCY1A2P33402 732 aa26.1■■□□□ 1.77
HOMER3-204ENST00000539827 KRT40Q6A162 431 aa26.1■■□□□ 1.77
HOMER3-204ENST00000539827 NBPF11Q86T75 865 aa26.1■■□□□ 1.77
HOMER3-204ENST00000539827 SLC16A10Q8TF71 515 aa26.1■■□□□ 1.77
HOMER3-204ENST00000539827 CRACR2BQ8N4Y2 399 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms