RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ATP8A2Q9NTI2 1148 aa20.28■□□□□ 0.84
SNX17-210ENST00000537606 PCDHA7Q9UN72 937 aa20.28■□□□□ 0.84
SNX17-210ENST00000537606 RIMBP2O15034 1052 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
SNX17-210ENST00000537606 IFNAR1P17181 557 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 HOXA10P31260 410 aaPredicted RBP20.27■□□□□ 0.84
SNX17-210ENST00000537606 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.84
SNX17-210ENST00000537606 ATL3Q6DD88 541 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 DDX19AQ9NUU7 478 aaKnown RBP20.27■□□□□ 0.84
SNX17-210ENST00000537606 RTEL1Q9NZ71 1219 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 NOL7Q9UMY1 257 aaKnown RBP20.27■□□□□ 0.84
SNX17-210ENST00000537606 AP5Z1O43299 807 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 ADCY5O95622 1261 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 CCDC192P0DO97 292 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 USP5P45974 858 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 STK38Q15208 465 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 UVSSAQ2YD98 709 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 IFIT1BQ5T764 474 aaKnown RBP20.27■□□□□ 0.84
SNX17-210ENST00000537606 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 CLSTN2Q9H4D0 955 aa20.27■□□□□ 0.84
SNX17-210ENST00000537606 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 PLSCR1O15162 318 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 PTMAP06454 111 aaKnown RBP20.26■□□□□ 0.83
SNX17-210ENST00000537606 TYRO3Q06418 890 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
SNX17-210ENST00000537606 HS1BP3Q53T59 392 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 BRAPQ7Z569 592 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 TRIM29Q14134 588 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 C15orf52Q6ZUT6 534 aaKnown RBP20.26■□□□□ 0.83
SNX17-210ENST00000537606 IQCA1Q86XH1 822 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 CRAMP1Q96RY5 1269 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 MRVI1Q9Y6F6 885 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
SNX17-210ENST00000537606 hCG_1642624A0A1W2PR95 340 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 FGRP09769 529 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 NBPF11Q86T75 865 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 NLGN1Q8N2Q7 840 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
SNX17-210ENST00000537606 TGFBRAP1Q8WUH2 860 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNX17-210ENST00000537606 KLRG2A4D1S0 409 aaPredicted RBP20.25■□□□□ 0.83
SNX17-210ENST00000537606 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
SNX17-210ENST00000537606 FSIP1Q8NA03 581 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 DYNLL2Q96FJ2 89 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
SNX17-210ENST00000537606 MMP10P09238 476 aa20.24■□□□□ 0.83
SNX17-210ENST00000537606 TRIM22Q8IYM9 498 aa20.24■□□□□ 0.83
SNX17-210ENST00000537606 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
SNX17-210ENST00000537606 CCDC39Q9UFE4 941 aa20.24■□□□□ 0.83
SNX17-210ENST00000537606 A0A1B0GVL5 298 aa20.24■□□□□ 0.83
SNX17-210ENST00000537606 IL1R1P14778 569 aa20.24■□□□□ 0.83
SNX17-210ENST00000537606 SNW1Q13573 536 aaKnown RBP20.24■□□□□ 0.83
SNX17-210ENST00000537606 ANO1Q5XXA6 986 aa20.24■□□□□ 0.83
SNX17-210ENST00000537606 SPTLC2O15270 562 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 MARCKSP29966 332 aaPredicted RBP20.23■□□□□ 0.83
SNX17-210ENST00000537606 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 CCDC73Q6ZRK6 1079 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 MAPKAPK5Q8IW41 473 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 ZNF830Q96NB3 372 aaPredicted RBP20.23■□□□□ 0.83
SNX17-210ENST00000537606 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
SNX17-210ENST00000537606 POLR3EQ9NVU0 708 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 PODXL2Q9NZ53 605 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
SNX17-210ENST00000537606 SAP30BPQ9UHR5 308 aaKnown RBP20.23■□□□□ 0.83
SNX17-210ENST00000537606 ZKSCAN5Q9Y2L8 839 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 CCDC196A0A1B0GTZ2 297 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 LUZP1Q86V48 1076 aa20.23■□□□□ 0.83
SNX17-210ENST00000537606 NAP1L5Q96NT1 182 aaPredicted RBP20.23■□□□□ 0.83
SNX17-210ENST00000537606 STK36Q9NRP7 1315 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 BTBD18B2RXH4 712 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 PLEKHA8P1O95397 391 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 BAG3O95817 575 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 SRGNP10124 158 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 RXRBP28702 533 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 GSTO1P78417 241 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 ANO6Q4KMQ2 910 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 SBK1Q52WX2 424 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
SNX17-210ENST00000537606 FBXW7Q969H0 707 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNX17-210ENST00000537606 NID2Q14112 1375 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 ORC4O43929 436 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
SNX17-210ENST00000537606 PDE4BQ07343 736 aa20.22■□□□□ 0.83
SNX17-210ENST00000537606 RTFDC1Q9BY42 306 aaPredicted RBP20.22■□□□□ 0.83
SNX17-210ENST00000537606 ECM29Q5VYK3 1845 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 MROH7-TTC4A0A0A0MT08 1334 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 PCP11498 1178 aaKnown RBP20.21■□□□□ 0.83
SNX17-210ENST00000537606 BTDP43251 543 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 GTF2IP78347 998 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 TROAPQ12815 778 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 C12orf60Q5U649 245 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 ADALQ6DHV7 355 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 SP8Q8IXZ3 490 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 ENGASEQ8NFI3 743 aa20.21■□□□□ 0.83
SNX17-210ENST00000537606 NOL10Q9BSC4 688 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms