RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 POU5F2Q8N7G0 328 aa8.92□□□□□ -0.98
VBP1-203ENST00000535916 PCDHA4Q9UN74 947 aa8.92□□□□□ -0.98
VBP1-203ENST00000535916 CARMIL2Q6F5E8 1435 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 BIN1O00499 593 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 GIPC1O14908 333 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 ATP2B2Q01814 1243 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 LRRC14Q15048 493 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 PI4K2BQ8TCG2 481 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 ANKRD24Q8TF21 1146 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 TNKS2Q9H2K2 1166 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 C12orf49Q9H741 205 aa8.91□□□□□ -0.98
VBP1-203ENST00000535916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
VBP1-203ENST00000535916 FANCGO15287 622 aa8.9□□□□□ -0.98
VBP1-203ENST00000535916 USP17L7P0C7H9 530 aa8.9□□□□□ -0.98
VBP1-203ENST00000535916 PCNX4Q63HM2 1172 aa8.9□□□□□ -0.98
VBP1-203ENST00000535916 LRRN4CLQ8ND94 238 aa8.9□□□□□ -0.98
VBP1-203ENST00000535916 GTF2IRD1Q9UHL9 959 aa8.9□□□□□ -0.98
VBP1-203ENST00000535916 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
VBP1-203ENST00000535916 P4HBP07237 508 aaKnown RBP8.89□□□□□ -0.99
VBP1-203ENST00000535916 KCNA1Q09470 495 aa8.89□□□□□ -0.99
VBP1-203ENST00000535916 ATG4DQ86TL0 474 aaPredicted RBP8.89□□□□□ -0.99
VBP1-203ENST00000535916 IGF2BP3O00425 579 aaKnown RBP eCLIP8.88□□□□□ -0.99
VBP1-203ENST00000535916 C8AP07357 584 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 PTPN11Q06124 597 aaPredicted RBP8.88□□□□□ -0.99
VBP1-203ENST00000535916 INPP5AQ14642 412 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 ANGEL2Q5VTE6 544 aaKnown RBP8.88□□□□□ -0.99
VBP1-203ENST00000535916 CDC37L1Q7L3B6 337 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 SPACA3Q8IXA5 215 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 ELMO3Q96BJ8 720 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 FAM8A1Q9UBU6 413 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 CYP8B1Q9UNU6 501 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 SNX11Q9Y5W9 270 aa8.88□□□□□ -0.99
VBP1-203ENST00000535916 EOMESO95936 686 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 JAG1P78504 1218 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 SCARA3Q6AZY7 606 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 LRFN4Q6PJG9 635 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 ARMCX6Q7L4S7 300 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 FAM168AQ92567 244 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 PRDM7Q9NQW5 492 aa8.87□□□□□ -0.99
VBP1-203ENST00000535916 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
VBP1-203ENST00000535916 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
VBP1-203ENST00000535916 NKPD1Q17RQ9 610 aa8.86□□□□□ -0.99
VBP1-203ENST00000535916 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
VBP1-203ENST00000535916 SLC23A3Q6PIS1 610 aa8.85□□□□□ -0.99
VBP1-203ENST00000535916 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.85□□□□□ -0.99
VBP1-203ENST00000535916 KCT2Q8NC54 265 aa8.85□□□□□ -0.99
VBP1-203ENST00000535916 GAL3ST3Q96A11 431 aa8.85□□□□□ -0.99
VBP1-203ENST00000535916 PLPPR2Q96GM1 343 aa8.85□□□□□ -0.99
VBP1-203ENST00000535916 FBRSQ9HAH7 460 aa8.85□□□□□ -0.99
VBP1-203ENST00000535916 TTF2Q9UNY4 1162 aaKnown RBP8.85□□□□□ -0.99
VBP1-203ENST00000535916 IKZF1Q13422 519 aa8.84□□□□□ -0.99
VBP1-203ENST00000535916 ZNF648Q5T619 568 aaPredicted RBP8.84□□□□□ -0.99
VBP1-203ENST00000535916 SV2BQ7L1I2 683 aa8.84□□□□□ -0.99
VBP1-203ENST00000535916 CYFIP1Q7L576 1253 aa8.84□□□□□ -0.99
VBP1-203ENST00000535916 ZNF507Q8TCN5 953 aa8.84□□□□□ -0.99
VBP1-203ENST00000535916 ASB11Q8WXH4 323 aa8.84□□□□□ -0.99
VBP1-203ENST00000535916 PRDM5Q9NQX1 630 aaPredicted RBP8.84□□□□□ -0.99
VBP1-203ENST00000535916 GNAT3A8MTJ3 354 aa8.83□□□□□ -1
VBP1-203ENST00000535916 LRIG2O94898 1065 aa8.83□□□□□ -1
VBP1-203ENST00000535916 CDK8P49336 464 aa8.83□□□□□ -1
VBP1-203ENST00000535916 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
VBP1-203ENST00000535916 PITPNM2Q9BZ72 1349 aa8.82□□□□□ -1
VBP1-203ENST00000535916 SLITRK5O94991 958 aa8.82□□□□□ -1
VBP1-203ENST00000535916 ZP2Q05996 745 aa8.82□□□□□ -1
VBP1-203ENST00000535916 SLBPQ14493 270 aaKnown RBP eCLIP8.82□□□□□ -1
VBP1-203ENST00000535916 WIPI1Q5MNZ9 446 aaPredicted RBP8.82□□□□□ -1
VBP1-203ENST00000535916 TTBK2Q6IQ55 1244 aa8.82□□□□□ -1
VBP1-203ENST00000535916 HDXQ7Z353 690 aa8.82□□□□□ -1
VBP1-203ENST00000535916 MAPK8IP1Q9UQF2 711 aa8.82□□□□□ -1
VBP1-203ENST00000535916 CLCN7P51798 805 aa8.81□□□□□ -1
VBP1-203ENST00000535916 NKG7Q16617 165 aa8.81□□□□□ -1
VBP1-203ENST00000535916 FOXQ1Q9C009 403 aa8.81□□□□□ -1
VBP1-203ENST00000535916 WNT10AQ9GZT5 417 aa8.81□□□□□ -1
VBP1-203ENST00000535916 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
VBP1-203ENST00000535916 PRR33A8MZF0 331 aa8.8□□□□□ -1
VBP1-203ENST00000535916 EIF4BP23588 611 aaKnown RBP8.8□□□□□ -1
VBP1-203ENST00000535916 GNA15P30679 374 aa8.8□□□□□ -1
VBP1-203ENST00000535916 FLAD1Q8NFF5 587 aa8.8□□□□□ -1
VBP1-203ENST00000535916 FRMD6Q96NE9 622 aa8.8□□□□□ -1
VBP1-203ENST00000535916 MIPEPQ99797 713 aa8.8□□□□□ -1
VBP1-203ENST00000535916 ETF1P62495 437 aaKnown RBP8.79□□□□□ -1
VBP1-203ENST00000535916 TMEM40Q8WWA1 233 aa8.79□□□□□ -1
VBP1-203ENST00000535916 RNF19AQ9NV58 838 aa8.79□□□□□ -1
VBP1-203ENST00000535916 TPX2Q9ULW0 747 aaKnown RBP8.79□□□□□ -1
VBP1-203ENST00000535916 RBAK-RBAKDNI3L0D1 243 aa8.78□□□□□ -1
VBP1-203ENST00000535916 PRPF40AO75400 957 aaKnown RBP8.78□□□□□ -1
VBP1-203ENST00000535916 SEPT6Q14141 434 aa8.78□□□□□ -1
VBP1-203ENST00000535916 CCDC85BQ15834 202 aaPredicted RBP8.78□□□□□ -1
VBP1-203ENST00000535916 ZNF124Q15973 351 aa8.78□□□□□ -1
VBP1-203ENST00000535916 HSPA12BQ96MM6 686 aa8.78□□□□□ -1
VBP1-203ENST00000535916 PCDHB5Q9Y5E4 795 aa8.78□□□□□ -1
VBP1-203ENST00000535916 SNCAIPQ9Y6H5 919 aa8.78□□□□□ -1
VBP1-203ENST00000535916 FAM155AB1AL88 458 aaPredicted RBP8.77□□□□□ -1.01
VBP1-203ENST00000535916 CAP2P40123 477 aa8.77□□□□□ -1.01
VBP1-203ENST00000535916 FGD1P98174 961 aa8.77□□□□□ -1.01
VBP1-203ENST00000535916 SFRP5Q5T4F7 317 aa8.77□□□□□ -1.01
VBP1-203ENST00000535916 HID1Q8IV36 788 aa8.77□□□□□ -1.01
VBP1-203ENST00000535916 RIN3Q8TB24 985 aa8.77□□□□□ -1.01
VBP1-203ENST00000535916 SEMA3GQ9NS98 782 aa8.77□□□□□ -1.01
VBP1-203ENST00000535916 CTNND2Q9UQB3 1225 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms