RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 UTP4Q969X6 686 aaKnown RBP4.08□□□□□ -1.76
CSDE1-216ENST00000534389 LENG1Q96BZ8 264 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-216ENST00000534389 GPRASP2Q96D09 838 aa4.08□□□□□ -1.76
CSDE1-216ENST00000534389 SPATA32Q96LK8 384 aa4.08□□□□□ -1.76
CSDE1-216ENST00000534389 FERD3LQ96RJ6 166 aa4.08□□□□□ -1.76
CSDE1-216ENST00000534389 CRBNQ96SW2 442 aa4.08□□□□□ -1.76
CSDE1-216ENST00000534389 ATXN3LQ9H3M9 355 aa4.08□□□□□ -1.76
CSDE1-216ENST00000534389 PRKRIP1Q9H875 184 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-216ENST00000534389 R3HCC1Q9Y3T6 440 aaKnown RBP4.08□□□□□ -1.76
CSDE1-216ENST00000534389 RAPGEF2Q9Y4G8 1499 aa4.08□□□□□ -1.76
CSDE1-216ENST00000534389 CNTLNQ9NXG0 1405 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 ARID4BQ4LE39 1312 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 F8W735 103 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 F13A1P00488 732 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 SSBP05455 408 aaKnown RBP eCLIP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 TPM2P07951 284 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 HSPA5P11021 654 aaKnown RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 TNNI2P48788 182 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 ZNF165P49910 485 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 RPL6Q02878 288 aaKnown RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 PAK2Q13177 524 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 NAALADL2Q58DX5 795 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 LDLRAD1Q5T700 205 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 SCARA3Q6AZY7 606 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 FBXL19Q6PCT2 694 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 BNC2Q6ZN30 1099 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 CCDC84Q86UT8 332 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 METTL16Q86W50 562 aaKnown RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 C12orf40Q86WS4 652 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 GATAD2BQ8WXI9 593 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 ZNF830Q96NB3 372 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 WDR18Q9BV38 432 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 CHMP4BQ9H444 224 aaKnown RBP4.07□□□□□ -1.76
CSDE1-216ENST00000534389 TMEM51Q9NW97 253 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 UBP1Q9NZI7 540 aa4.07□□□□□ -1.76
CSDE1-216ENST00000534389 BAZ1AQ9NRL2 1556 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 FHAD1B1AJZ9 1412 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 ROBO2Q9HCK4 1378 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 USP19O94966 1318 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 GRIN3BO60391 1043 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 ADH5P11766 374 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 HCLS1P14317 486 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 DRD2P14416 443 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 SELPP16109 830 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 CHRNA4P43681 627 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 GATA4P43694 442 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 RACK1P63244 317 aaKnown RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 ARID5AQ03989 594 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 SOX4Q06945 474 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 ZNF252P-AS1Q0IIN9 211 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 MPP2Q14168 576 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 SF3A1Q15459 793 aaKnown RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 TAF7LQ5H9L4 462 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 MPRIPQ6WCQ1 1025 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 GK5Q6ZS86 529 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 FAM196AQ6ZSG2 479 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 KIAA1211Q6ZU35 1233 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 PDZD3Q86UT5 571 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 TXNRD3Q86VQ6 643 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 SMAP1Q8IYB5 467 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 WFDC12Q8WWY7 111 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 WDR89Q96FK6 387 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 PLPPR2Q96GM1 343 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 RHOVQ96L33 236 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 TANGO6Q9C0B7 1094 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 LGR6Q9HBX8 967 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 KLHL3Q9UH77 587 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 ADAMTS1Q9UHI8 967 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 ZHX1Q9UKY1 873 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-216ENST00000534389 DAGLAQ9Y4D2 1042 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 SNCAIPQ9Y6H5 919 aa4.06□□□□□ -1.76
CSDE1-216ENST00000534389 MEGF11A6BM72 1044 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 DHX15O43143 795 aaKnown RBP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 ZNF862O60290 1169 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 ITGB2P05107 769 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PGRP06401 933 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 CTSBP07858 339 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PLCG1P19174 1290 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 RRP1P56182 461 aaKnown RBP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 KIF4BQ2VIQ3 1234 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PLA2G4EQ3MJ16 856 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PPM1JQ5JR12 505 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 L1TD1Q5T7N2 865 aaKnown RBP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 RASIP1Q5U651 963 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 LRFN4Q6PJG9 635 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 CD163Q86VB7 1156 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 TMEM130Q8N3G9 435 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 KCT2Q8NC54 265 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 SMG8Q8ND04 991 aaKnown RBP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 ZNF507Q8TCN5 953 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 IPO4Q8TEX9 1081 aaKnown RBP4.05□□□□□ -1.76
CSDE1-216ENST00000534389 TP53INP1Q96A56 240 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 NT5C1AQ9BXI3 368 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 TMPRSS13Q9BYE2 586 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 PRDM10Q9NQV6 1147 aa4.05□□□□□ -1.76
CSDE1-216ENST00000534389 EFR3BQ9Y2G0 817 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms