RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 IRF6O14896 467 aa21■□□□□ 0.95
USP35-202ENST00000528910 UBE3CQ15386 1083 aa21■□□□□ 0.95
USP35-202ENST00000528910 METTL16Q86W50 562 aaKnown RBP21■□□□□ 0.95
USP35-202ENST00000528910 PI4K2BQ8TCG2 481 aa21■□□□□ 0.95
USP35-202ENST00000528910 BRI3BPQ8WY22 251 aa21■□□□□ 0.95
USP35-202ENST00000528910 PI4KBQ9UBF8 816 aa21■□□□□ 0.95
USP35-202ENST00000528910 KCNH4Q9UQ05 1017 aa21■□□□□ 0.95
USP35-202ENST00000528910 FAM196BA6NMK8 535 aa20.99■□□□□ 0.95
USP35-202ENST00000528910 CTNND1O60716 968 aaKnown RBP20.99■□□□□ 0.95
USP35-202ENST00000528910 MX1P20591 662 aa20.99■□□□□ 0.95
USP35-202ENST00000528910 PTPN18Q99952 460 aa20.99■□□□□ 0.95
USP35-202ENST00000528910 RWDD1Q9H446 243 aaPredicted RBP20.99■□□□□ 0.95
USP35-202ENST00000528910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.99■□□□□ 0.953e-6■□□□□ 11.1
USP35-202ENST00000528910 CCL15-CCL14A0A0B4J2E2 113 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 ERC2O15083 957 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 GLRX3O76003 335 aaKnown RBP20.98■□□□□ 0.95
USP35-202ENST00000528910 USP5P45974 858 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 CCL15Q16663 113 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 DNAJC18Q9H819 358 aa20.98■□□□□ 0.95
USP35-202ENST00000528910 SNAPC2Q13487 334 aa20.97■□□□□ 0.95
USP35-202ENST00000528910 OTUD7BQ6GQQ9 843 aa20.97■□□□□ 0.95
USP35-202ENST00000528910 ZSCAN25Q6NSZ9 544 aa20.97■□□□□ 0.95
USP35-202ENST00000528910 LCORLQ8N3X6 602 aa20.97■□□□□ 0.95
USP35-202ENST00000528910 CRNKL1Q9BZJ0 848 aaKnown RBP20.97■□□□□ 0.95
USP35-202ENST00000528910 PALD1Q9ULE6 856 aa20.97■□□□□ 0.95
USP35-202ENST00000528910 TBC1D8O95759 1140 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 HLA-DOAP06340 250 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 CETPP11597 493 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 PTPRAP18433 802 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 SLFNL1Q499Z3 407 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 EHD4Q9H223 541 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 ZCCHC17Q9NP64 241 aaKnown RBP20.96■□□□□ 0.95
USP35-202ENST00000528910 PICK1Q9NRD5 415 aa20.96■□□□□ 0.95
USP35-202ENST00000528910 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
USP35-202ENST00000528910 SAP30BPQ9UHR5 308 aaKnown RBP20.96■□□□□ 0.95
USP35-202ENST00000528910 CAPN15O75808 1086 aa20.95■□□□□ 0.94
USP35-202ENST00000528910 MBD4O95243 580 aa20.95■□□□□ 0.94
USP35-202ENST00000528910 IGHDP01880 384 aa20.95■□□□□ 0.94
USP35-202ENST00000528910 CHGBP05060 677 aa20.95■□□□□ 0.94
USP35-202ENST00000528910 FOXP4Q8IVH2 680 aaPredicted RBP20.95■□□□□ 0.94
USP35-202ENST00000528910 STAP2Q9UGK3 403 aa20.95■□□□□ 0.94
USP35-202ENST00000528910 GPR25O00155 361 aa20.94■□□□□ 0.94
USP35-202ENST00000528910 CAP2P40123 477 aa20.94■□□□□ 0.94
USP35-202ENST00000528910 RRP1BQ14684 758 aaKnown RBP20.94■□□□□ 0.94
USP35-202ENST00000528910 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
USP35-202ENST00000528910 R3HDMLQ9H3Y0 253 aa20.94■□□□□ 0.94
USP35-202ENST00000528910 ARMT1Q9H993 441 aa20.94■□□□□ 0.94
USP35-202ENST00000528910 CXCL11O14625 94 aa20.93■□□□□ 0.94
USP35-202ENST00000528910 CRHR2Q13324 411 aa20.93■□□□□ 0.94
USP35-202ENST00000528910 MOGSQ13724 837 aa20.93■□□□□ 0.94
USP35-202ENST00000528910 CRACR2BQ8N4Y2 399 aaPredicted RBP20.93■□□□□ 0.94
USP35-202ENST00000528910 DCP1AQ9NPI6 582 aaPredicted RBP20.93■□□□□ 0.94
USP35-202ENST00000528910 AFG3L2Q9Y4W6 797 aa20.93■□□□□ 0.94
USP35-202ENST00000528910 ZFYP08048 801 aaPredicted RBP20.92■□□□□ 0.94
USP35-202ENST00000528910 PDE1AP54750 535 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 TTC6Q86TZ1 520 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 SDR42E1Q8WUS8 393 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 ZNF296Q8WUU4 475 aaPredicted RBP20.92■□□□□ 0.94
USP35-202ENST00000528910 APPBP2Q92624 585 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 TBC1D2Q9BYX2 928 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.92■□□□□ 0.94
USP35-202ENST00000528910 SERPINB13Q9UIV8 391 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 ZHX2Q9Y6X8 837 aa20.92■□□□□ 0.94
USP35-202ENST00000528910 A0A0G2JLL6 359 aaPredicted RBP20.91■□□□□ 0.94
USP35-202ENST00000528910 BTBD19C9JJ37 291 aa20.91■□□□□ 0.94
USP35-202ENST00000528910 NUCB1Q02818 461 aa20.91■□□□□ 0.94
USP35-202ENST00000528910 PRRT2Q7Z6L0 340 aaPredicted RBP20.91■□□□□ 0.94
USP35-202ENST00000528910 ANKRD23Q86SG2 305 aa20.91■□□□□ 0.94
USP35-202ENST00000528910 PUS7LQ9H0K6 701 aaKnown RBP20.91■□□□□ 0.94
USP35-202ENST00000528910 ATP8A2Q9NTI2 1148 aa20.91■□□□□ 0.94
USP35-202ENST00000528910 GINM1Q9NU53 330 aa20.91■□□□□ 0.94
USP35-202ENST00000528910 RNF113AO15541 343 aaKnown RBP20.9■□□□□ 0.94
USP35-202ENST00000528910 IRX6P78412 446 aaPredicted RBP20.9■□□□□ 0.94
USP35-202ENST00000528910 GABPAQ06546 454 aa20.9■□□□□ 0.94
USP35-202ENST00000528910 TAF1CQ15572 869 aaPredicted RBP20.9■□□□□ 0.94
USP35-202ENST00000528910 SLC4A8Q2Y0W8 1093 aa20.9■□□□□ 0.94
USP35-202ENST00000528910 LRRFIP1Q32MZ4 808 aaKnown RBP20.9■□□□□ 0.94
USP35-202ENST00000528910 TATDN1Q6P1N9 297 aa20.9■□□□□ 0.94
USP35-202ENST00000528910 TRIM34Q9BYJ4 488 aa20.9■□□□□ 0.94
USP35-202ENST00000528910 TAOK2Q9UL54 1235 aa20.9■□□□□ 0.94
USP35-202ENST00000528910 PRKAB2O43741 272 aa20.89■□□□□ 0.93
USP35-202ENST00000528910 ASNSP08243 561 aa20.89■□□□□ 0.93
USP35-202ENST00000528910 CCDC84Q86UT8 332 aaPredicted RBP20.89■□□□□ 0.93
USP35-202ENST00000528910 CHD1LQ86WJ1 897 aa20.89■□□□□ 0.93
USP35-202ENST00000528910 MCM9Q9NXL9 1143 aa20.89■□□□□ 0.93
USP35-202ENST00000528910 ADGRA2Q96PE1 1338 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 FKTNO75072 461 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 PLCD1P51178 756 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 OSBP2Q969R2 916 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 FSD1Q9BTV5 496 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 ZFYVE28Q9HCC9 887 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 ZBTB21Q9ULJ3 1066 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 GREB1LQ9C091 1923 aaPredicted RBP20.88■□□□□ 0.93
USP35-202ENST00000528910 ZSWIM8A7E2V4 1837 aa20.88■□□□□ 0.93
USP35-202ENST00000528910 USP17L5A8MUK1 530 aa20.87■□□□□ 0.93
USP35-202ENST00000528910 POLR3DP05423 398 aaPredicted RBP20.87■□□□□ 0.93
USP35-202ENST00000528910 SHMT1P34896 483 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms