RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 PRAMEF18Q5VWM3 479 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 ARMC9Q7Z3E5 817 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 NBPF11Q86T75 865 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 AGBL3Q8NEM8 1001 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 RTL9Q8NET4 1388 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 ADAM32Q8TC27 787 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 PNISRQ8TF01 805 aaKnown RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 CFAP53Q96M91 514 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 EFCC1Q9HA90 598 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 MYOZ2Q9NPC6 264 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 TRMT112Q9UI30 125 aaKnown RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 SCAF8Q9UPN6 1271 aaKnown RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 NUDCQ9Y266 331 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 MYH3P11055 1940 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 ZNF646O15015 1829 aaPredicted RBP7.13□□□□□ -1.27
CHKA-204ENST00000528235 SH3TC1Q8TE82 1336 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 MANSC4A6NHS7 340 aaPredicted RBP7.13□□□□□ -1.27
CHKA-204ENST00000528235 FIGNL2A6NMB9 653 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 NEFMP07197 916 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 USP17L8P0C7I0 530 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 ARHGEF6Q15052 776 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 INTS6LQ5JSJ4 861 aaKnown RBP7.13□□□□□ -1.27
CHKA-204ENST00000528235 OTUD7BQ6GQQ9 843 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 CD99L2Q8TCZ2 262 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 DPF3Q92784 378 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 ARMC5Q96C12 935 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 POLLQ9UGP5 575 aa7.13□□□□□ -1.27
CHKA-204ENST00000528235 U2AF1L5P0DN76 240 aaPredicted RBP7.12□□□□□ -1.27
CHKA-204ENST00000528235 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
CHKA-204ENST00000528235 GPSM2P81274 684 aa7.12□□□□□ -1.27
CHKA-204ENST00000528235 U2AF1Q01081 240 aaKnown RBP eCLIP7.12□□□□□ -1.27
CHKA-204ENST00000528235 PTPN12Q05209 780 aaKnown RBP7.12□□□□□ -1.27
CHKA-204ENST00000528235 SLC9C1Q4G0N8 1177 aa7.12□□□□□ -1.27
CHKA-204ENST00000528235 TBC1D16Q8TBP0 767 aa7.12□□□□□ -1.27
CHKA-204ENST00000528235 THUMPD2Q9BTF0 503 aaKnown RBP7.12□□□□□ -1.27
CHKA-204ENST00000528235 ANKIB1Q9P2G1 1089 aa7.12□□□□□ -1.27
CHKA-204ENST00000528235 ANGEL1Q9UNK9 670 aaKnown RBP7.12□□□□□ -1.27
CHKA-204ENST00000528235 MYCP01106 439 aaPredicted RBP7.11□□□□□ -1.27
CHKA-204ENST00000528235 EIF2S2P20042 333 aaKnown RBP7.11□□□□□ -1.27
CHKA-204ENST00000528235 ZEB1P37275 1124 aaPredicted RBP7.11□□□□□ -1.27
CHKA-204ENST00000528235 EIF4A1P60842 406 aaKnown RBP7.11□□□□□ -1.27
CHKA-204ENST00000528235 FGD1P98174 961 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 RELBQ01201 579 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 SP3Q02447 781 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 AIMP1Q12904 312 aaKnown RBP7.11□□□□□ -1.27
CHKA-204ENST00000528235 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 NLRP10Q86W26 655 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 OGFOD1Q8N543 542 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 CELF1Q92879 486 aaKnown RBP7.11□□□□□ -1.27
CHKA-204ENST00000528235 OCSTAMPQ9BR26 566 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 MGAMO43451 1857 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 ZSWIM8A7E2V4 1837 aa7.11□□□□□ -1.27
CHKA-204ENST00000528235 ZNF609O15014 1411 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 OTOFQ9HC10 1997 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 UFL1O94874 794 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 ZBTB48P10074 688 aaPredicted RBP7.1□□□□□ -1.27
CHKA-204ENST00000528235 HSP90B1P14625 803 aaKnown RBP7.1□□□□□ -1.27
CHKA-204ENST00000528235 CDK11BP21127 795 aaKnown RBP7.1□□□□□ -1.27
CHKA-204ENST00000528235 RPS8P62241 208 aaKnown RBP7.1□□□□□ -1.27
CHKA-204ENST00000528235 NANOS1Q8WY41 292 aaKnown RBP7.1□□□□□ -1.27
CHKA-204ENST00000528235 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 ZNF333Q96JL9 665 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 POLMQ9NP87 494 aaPredicted RBP7.1□□□□□ -1.27
CHKA-204ENST00000528235 GGA1Q9UJY5 639 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 HTTP42858 3142 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 BRCA2P51587 3418 aa7.1□□□□□ -1.27
CHKA-204ENST00000528235 USP17L3A6NCW0 530 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 USP17L4A6NCW7 530 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
CHKA-204ENST00000528235 PPP1R12BO60237 982 aaPredicted RBP7.09□□□□□ -1.27
CHKA-204ENST00000528235 RFC5P40937 340 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 CTSOP43234 321 aaPredicted RBP7.09□□□□□ -1.27
CHKA-204ENST00000528235 CRHR2Q13324 411 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 SF3B3Q15393 1217 aaKnown RBP7.09□□□□□ -1.27
CHKA-204ENST00000528235 COPS6Q7L5N1 327 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 USP17L1Q7RTZ2 530 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 APOBEC3FQ8IUX4 373 aaKnown RBP7.09□□□□□ -1.27
CHKA-204ENST00000528235 EPS8L1Q8TE68 723 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 AGBL1Q96MI9 1066 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 INSM2Q96T92 566 aaPredicted RBP7.09□□□□□ -1.27
CHKA-204ENST00000528235 GOPCQ9HD26 462 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 COL6A3P12111 3177 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 AK9Q5TCS8 1911 aa7.09□□□□□ -1.27
CHKA-204ENST00000528235 A0A0C4DFX4 3053 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 ALPK3Q96L96 1907 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 SLC35F4A4IF30 521 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 WTIPA6NIX2 430 aaPredicted RBP7.08□□□□□ -1.28
CHKA-204ENST00000528235 WNT10BO00744 389 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 ANXA1P04083 346 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 RAB15P59190 212 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 GLIPR1L2Q4G1C9 344 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 TMEM259Q4ZIN3 620 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 LDLRAD1Q5T700 205 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 FAM89AQ96GI7 184 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 WNK4Q96J92 1243 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 PCMTD1Q96MG8 357 aaPredicted RBP7.08□□□□□ -1.28
CHKA-204ENST00000528235 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 HTATIP2Q9BUP3 242 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms