RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 POLR3DP05423 398 aaPredicted RBP7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 TDO2P48775 406 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 CACNB3P54284 484 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 TCP10Q12799 353 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 PICALMQ13492 652 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 TSGA10IPQ3SY00 556 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 TATDN1Q6P1N9 297 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 CCDC129Q6ZRS4 1044 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 KLRG1Q96E93 195 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZNF341Q9BYN7 854 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 TBC1D2Q9BYX2 928 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 GLIS2Q9BZE0 524 aaPredicted RBP7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 TMEM39BQ9GZU3 492 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 LSG1Q9H089 658 aaKnown RBP7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 IL25Q9H293 177 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 RNF41Q9H4P4 317 aaPredicted RBP7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 EPB41L4AQ9HCS5 686 aaPredicted RBP7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 PALD1Q9ULE6 856 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 SSC5DA1L4H1 1573 aa7.58□□□□□ -1.2
IGHV4-55-201ENST00000520889 ADM5C9JUS6 153 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZNF213O14771 459 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 ORC4O43929 436 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 CTNND1O60716 968 aaKnown RBP7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 IREB2P48200 963 aaKnown RBP7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 PLCD1P51178 756 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 PDE4BQ07343 736 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 PPARAQ07869 468 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 NECTIN1Q15223 517 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 IMMTQ16891 758 aaKnown RBP7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 C8orf34Q49A92 452 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 NOL9Q5SY16 702 aaKnown RBP7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 VPS53Q5VIR6 699 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 C16orf86Q6ZW13 317 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 ARMC9Q7Z3E5 817 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZSCAN29Q8IWY8 852 aaPredicted RBP7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZFPM1Q8IX07 1006 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 C2orf69Q8N8R5 385 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 KCNB2Q92953 911 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 CCDC17Q96LX7 622 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 PHIPQ8WWQ0 1821 aa7.57□□□□□ -1.2
IGHV4-55-201ENST00000520889 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 USP2O75604 605 aaPredicted RBP7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 HSPA4P34932 840 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 MAP3K9P80192 1104 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 PTH1RQ03431 593 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 AKNAD1Q5T1N1 836 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 LDLRAD1Q5T700 205 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 ANKRD13AQ8IZ07 590 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 CRACR2BQ8N4Y2 399 aaPredicted RBP7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 STAG1Q8WVM7 1258 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 IL17RAQ96F46 866 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 GBA2Q9HCG7 927 aaPredicted RBP7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 ANO2Q9NQ90 1003 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 SYNPO2Q9UMS6 1093 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 PLIN4Q96Q06 1357 aa7.56□□□□□ -1.2
IGHV4-55-201ENST00000520889 PTPRFP10586 1907 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 TMEM88BA6NKF7 163 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 MINDY4BA8MYZ0 360 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CELF2O95319 508 aaKnown RBP7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 ASNSP08243 561 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CYP21A2P08686 494 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZKSCAN1P17029 563 aaPredicted RBP7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 MCCP23508 829 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 SHMT1P34896 483 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CAP2P40123 477 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CDK8P49336 464 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 APLP1P51693 650 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 ANAPC15P60006 121 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 KRT32Q14532 448 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CCDC178Q5BJE1 867 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CST9Q5W186 159 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 MFSD6Q6ZSS7 791 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 SCYL3Q8IZE3 742 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 KRT23Q9C075 422 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 DNAJC18Q9H819 358 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 CREBZFQ9NS37 354 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 TCP11L1Q9NUJ3 509 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 SAP30BPQ9UHR5 308 aaKnown RBP7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 TLL2Q9Y6L7 1015 aa7.55□□□□□ -1.2
IGHV4-55-201ENST00000520889 WDR19Q8NEZ3 1342 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 MYH4Q9Y623 1939 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 TRAF5O00463 557 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 HMGB1P09429 215 aaKnown RBP7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 NOVP48745 357 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 TRDNQ13061 729 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 CERKLQ49MI3 558 aaPredicted RBP7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 TMEM179Q6ZVK1 233 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 CDAN1Q8IWY9 1227 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms