RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 ACSF2Q96CM8 615 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-222ENST00000520400 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.25□□□□□ -1.251e-7■■□□□ 11.9
CTNNA1-222ENST00000520400 SSBP4Q9BWG4 385 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-222ENST00000520400 ZNF408Q9H9D4 720 aa7.25□□□□□ -1.25
CTNNA1-222ENST00000520400 REV1Q9UBZ9 1251 aa7.25□□□□□ -1.25
CTNNA1-222ENST00000520400 PPP1R1BQ9UD71 204 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-222ENST00000520400 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
CTNNA1-222ENST00000520400 UPK3BL1B0FP48 263 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 UPK3BL2E5RIL1 263 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 SLFN14P0C7P3 912 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 DZIP1LQ8IYY4 767 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 DRC1Q96MC2 740 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 WNT10AQ9GZT5 417 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 CYP4F12Q9HCS2 524 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 TJP2Q9UDY2 1190 aa7.24□□□□□ -1.25
CTNNA1-222ENST00000520400 C9orf172C9J069 976 aa7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 SGO2Q562F6 1265 aa7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 ANKRD34AQ69YU3 496 aa7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 FDX2Q6P4F2 183 aa7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 LSRQ86X29 649 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 DCAF11Q8TEB1 546 aa7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 DNAJC2Q99543 621 aaKnown RBP7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 SRRTQ9BXP5 876 aaKnown RBP7.23□□□□□ -1.25
CTNNA1-222ENST00000520400 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 APBA3O96018 575 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 PLCG1P19174 1290 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 ASPAP45381 313 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 GIPRP48546 466 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 ZNF165P49910 485 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 SLBPQ14493 270 aaKnown RBP eCLIP7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 TXNRD3Q86VQ6 643 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 FBLIM1Q8WUP2 373 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 ANAPC16Q96DE5 110 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 DPH2Q9BQC3 489 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 ACSS3Q9H6R3 686 aa7.22□□□□□ -1.25
CTNNA1-222ENST00000520400 SLC22A31A6NKX4 558 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 PGRP06401 933 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 ACRP10323 421 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 ATP2B1P20020 1258 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 RASSF7Q02833 373 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 COL9A2Q14055 689 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 TMEM201Q5SNT2 666 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 HP1BP3Q5SSJ5 553 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 OVOS1Q6IE37 1185 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 SHISA5Q8N114 240 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 SPATA32Q96LK8 384 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 TNKS2Q9H2K2 1166 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 SEMA6CQ9H3T2 930 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 LGR6Q9HBX8 967 aa7.21□□□□□ -1.26
CTNNA1-222ENST00000520400 FANCGO15287 622 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 RAB6AP20340 208 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 ETF1P62495 437 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 KCNMA1Q12791 1236 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 SF3A1Q15459 793 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 FBXW10Q5XX13 1052 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 VPS37DQ86XT2 251 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 NACC1Q96RE7 527 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 FERD3LQ96RJ6 166 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 ATXN3LQ9H3M9 355 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
CTNNA1-222ENST00000520400 MEIS3P2A8K0S8 358 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 SMAD7O15105 426 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 RNGTTO60942 597 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 NFICP08651 508 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 POLR2BP30876 1174 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 RBL2Q08999 1139 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 ZYXQ15942 572 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 SEZ6L2Q6UXD5 910 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 SMYD4Q8IYR2 804 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 RBBP8NLQ8NC74 664 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 HNRNPLLQ8WVV9 542 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 ATG4CQ96DT6 458 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 TMEM87BQ96K49 555 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 KLHL3Q9UH77 587 aa7.19□□□□□ -1.26
CTNNA1-222ENST00000520400 KLF4O43474 513 aa7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 SSBP05455 408 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 BMP3P12645 472 aa7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 EIF6P56537 245 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 MCATQ8IVS2 390 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 MICAL1Q8TDZ2 1067 aa7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 TMEM40Q8WWA1 233 aa7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 EZH1Q92800 747 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 MYRFLQ96LU7 910 aa7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 ADAM30Q9UKF2 790 aa7.18□□□□□ -1.26
CTNNA1-222ENST00000520400 LOC105371045A0A1W2PR82 267 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 FAM181BA6NEQ2 426 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 PLA2G4EQ3MJ16 856 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 ARSHQ5FYA8 562 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 PRAMEF13Q5VWM6 474 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 ALYREFQ86V81 257 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 FAM20CQ8IXL6 584 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 MRPL41Q8IXM3 137 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 CELF2-AS1Q8N7Q2 184 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 UBXN4Q92575 508 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 SLC9A7Q96T83 725 aa7.17□□□□□ -1.26
CTNNA1-222ENST00000520400 CEP41Q9BYV8 373 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms