RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 TTC6Q86TZ1 520 aa25.41■■□□□ 1.66
PTP4A3-203ENST00000520105 ZSCAN29Q8IWY8 852 aaPredicted RBP25.41■■□□□ 1.66
PTP4A3-203ENST00000520105 ENTPD3O75355 529 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 FGRP09769 529 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 NOL8Q76FK4 1167 aaKnown RBP25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 SLC44A5Q8NCS7 719 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 LARP6Q9BRS8 491 aaKnown RBP25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 ANP32EQ9BTT0 268 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 CNNM2Q9H8M5 875 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 ZC3H4Q9UPT8 1303 aaKnown RBP25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 GLTPD2A6NH11 291 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 KDM4AO75164 1064 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 LMOD1P29536 600 aaPredicted RBP25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 SLC4A3P48751 1232 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 AK2P54819 239 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 CYB5R4Q7L1T6 521 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 KRT23Q9C075 422 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 ZSWIM5Q9P217 1185 aa25.4■■□□□ 1.66
PTP4A3-203ENST00000520105 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.4■■□□□ 1.662e-6■■■■□ 22.8
PTP4A3-203ENST00000520105 HIRAP54198 1017 aaPredicted RBP25.39■■□□□ 1.66
PTP4A3-203ENST00000520105 ANTXR2P58335 489 aa25.39■■□□□ 1.66
PTP4A3-203ENST00000520105 PDE4BQ07343 736 aa25.39■■□□□ 1.66
PTP4A3-203ENST00000520105 CNTNAP1P78357 1384 aa25.39■■□□□ 1.65
PTP4A3-203ENST00000520105 SLURP2P0DP57 97 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 MCM5P33992 734 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 FKBP1CQ5VVH2 108 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 ROBO3Q96MS0 1386 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 PRC1O43663 620 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 HSCBQ8IWL3 235 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 DHX36Q9H2U1 1008 aaKnown RBP25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 HACL1Q9UJ83 578 aa25.38■■□□□ 1.65
PTP4A3-203ENST00000520105 HLA-DOAP06340 250 aa25.37■■□□□ 1.65
PTP4A3-203ENST00000520105 PCP11498 1178 aaKnown RBP25.37■■□□□ 1.65
PTP4A3-203ENST00000520105 Q6ZUG5 572 aa25.37■■□□□ 1.65
PTP4A3-203ENST00000520105 FAM151AQ8WW52 585 aa25.37■■□□□ 1.65
PTP4A3-203ENST00000520105 L3MBTL3Q96JM7 780 aaPredicted RBP25.37■■□□□ 1.65
PTP4A3-203ENST00000520105 IPO9Q96P70 1041 aaKnown RBP25.37■■□□□ 1.65
PTP4A3-203ENST00000520105 ORC4O43929 436 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 RANBP6O60518 1105 aaKnown RBP25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 CDK8P49336 464 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 TOB2Q14106 344 aaPredicted RBP25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 BECN1Q14457 450 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 C16orf86Q6ZW13 317 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 TMEM39BQ9GZU3 492 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 MKNK2Q9HBH9 465 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 GPHNQ9NQX3 736 aaPredicted RBP25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 ADARB2Q9NS39 739 aaKnown RBP25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 DCAF8L1A6NGE4 600 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 GABPAQ06546 454 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 ESR2Q92731 530 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 PI4KBQ9UBF8 816 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 SERPINB13Q9UIV8 391 aa25.36■■□□□ 1.65
PTP4A3-203ENST00000520105 FAM47AQ5JRC9 791 aa25.35■■□□□ 1.65
PTP4A3-203ENST00000520105 FAM83AQ86UY5 434 aa25.35■■□□□ 1.65
PTP4A3-203ENST00000520105 ALDH8A1Q9H2A2 487 aaPredicted RBP25.35■■□□□ 1.65
PTP4A3-203ENST00000520105 FGD1P98174 961 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 ANGEL2Q5VTE6 544 aaKnown RBP25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 CDAN1Q8IWY9 1227 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 IL27Q8NEV9 243 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 ZKSCAN3Q9BRR0 538 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 ATRNL1Q5VV63 1379 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 RASA3Q14644 834 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 CSRNP1Q96S65 589 aa25.34■■□□□ 1.65
PTP4A3-203ENST00000520105 FAM196BA6NMK8 535 aa25.33■■□□□ 1.65
PTP4A3-203ENST00000520105 K7ELQ4 463 aaPredicted RBP25.33■■□□□ 1.65
PTP4A3-203ENST00000520105 BRF1Q92994 677 aa25.33■■□□□ 1.65
PTP4A3-203ENST00000520105 RASA1P20936 1047 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 MCM2P49736 904 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 ZNF444Q8N0Y2 327 aaPredicted RBP25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 EHD4Q9H223 541 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 ZNF287Q9HBT7 754 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 SIPA1L1O43166 1804 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 TNNI2P48788 182 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 TNFAIP1Q13829 316 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 CRACR2BQ8N4Y2 399 aaPredicted RBP25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 WDR19Q8NEZ3 1342 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 AGXT2Q9BYV1 514 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 DNAJC18Q9H819 358 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 GGA3Q9NZ52 723 aa25.32■■□□□ 1.64
PTP4A3-203ENST00000520105 COL2A1P02458 1487 aaPredicted RBP25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 TFAP4Q01664 338 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 ANKRD1Q15327 319 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 FOXP4Q8IVH2 680 aaPredicted RBP25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 IGDCC4Q8TDY8 1250 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 TMX3Q96JJ7 454 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 PGAP2Q9UHJ9 254 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 TPCN1Q9ULQ1 816 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 LIMCH1Q9UPQ0 1083 aa25.31■■□□□ 1.64
PTP4A3-203ENST00000520105 POLR2AP24928 1970 aaKnown RBP25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 TSPY2A6NKD2 308 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 POTECB2RU33 542 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 SHMT1P34896 483 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 EPHX2P34913 555 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 DEFB129Q9H1M3 183 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 IFIT3O14879 490 aaKnown RBP25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 SENP2Q9HC62 589 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 SWAP70Q9UH65 585 aa25.3■■□□□ 1.64
PTP4A3-203ENST00000520105 NMT2O60551 498 aa25.29■■□□□ 1.64
PTP4A3-203ENST00000520105 APOBRQ0VD83 1088 aa25.29■■□□□ 1.64
PTP4A3-203ENST00000520105 TMEM67Q5HYA8 995 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms