RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 METRNQ9UJH8 293 aa15.55■□□□□ 0.08
PABPC1-205ENST00000518196 PPP2R3BQ9Y5P8 575 aa15.55■□□□□ 0.08
PABPC1-205ENST00000518196 RPAP1Q9BWH6 1393 aaPredicted RBP15.54■□□□□ 0.08
PABPC1-205ENST00000518196 CCDC171Q6TFL3 1326 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
PABPC1-205ENST00000518196 APPP05067 770 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 TCP10Q12799 353 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 NFIAQ12857 509 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 RASA3Q14644 834 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 MAPKAPK5Q8IW41 473 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 FAM151AQ8WW52 585 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 DEFB129Q9H1M3 183 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 FAM198AQ9UFP1 575 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 FOCADQ5VW36 1801 aa15.54■□□□□ 0.08
PABPC1-205ENST00000518196 MYH1P12882 1939 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 PRKAB2O43741 272 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 TOMM70O94826 608 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 E2F4Q16254 413 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 MAP1SQ66K74 1059 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-205ENST00000518196 GIMAP6Q6P9H5 292 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 ZNF589Q86UQ0 364 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-205ENST00000518196 USP48Q86UV5 1035 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 SDR42E1Q8WUS8 393 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 ESYT1Q9BSJ8 1104 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 NACAP1Q9BZK3 213 aa15.53■□□□□ 0.08
PABPC1-205ENST00000518196 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
PABPC1-205ENST00000518196 FLT1P17948 1338 aa15.52■□□□□ 0.08
PABPC1-205ENST00000518196 SGSM2O43147 1006 aa15.52■□□□□ 0.08
PABPC1-205ENST00000518196 C7P10643 843 aa15.52■□□□□ 0.08
PABPC1-205ENST00000518196 KIAA1211Q6ZU35 1233 aa15.52■□□□□ 0.08
PABPC1-205ENST00000518196 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-205ENST00000518196 AMOTL1Q8IY63 956 aa15.52■□□□□ 0.08
PABPC1-205ENST00000518196 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
PABPC1-205ENST00000518196 GLIS2Q9BZE0 524 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-205ENST00000518196 OSBPL5Q9H0X9 879 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-205ENST00000518196 DCP1AQ9NPI6 582 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-205ENST00000518196 SCAF8Q9UPN6 1271 aaKnown RBP15.52■□□□□ 0.08
PABPC1-205ENST00000518196 CNTNAP1P78357 1384 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 GSG1L2A8MUP6 293 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 ADM5C9JUS6 153 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 EIF5BO60841 1220 aaKnown RBP15.51■□□□□ 0.07
PABPC1-205ENST00000518196 POLR3DP05423 398 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-205ENST00000518196 TDO2P48775 406 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 MFSD10Q14728 455 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 TMEM39BQ9GZU3 492 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 DHX36Q9H2U1 1008 aaKnown RBP15.51■□□□□ 0.07
PABPC1-205ENST00000518196 MCM9Q9NXL9 1143 aa15.51■□□□□ 0.07
PABPC1-205ENST00000518196 BAZ2AQ9UIF9 1905 aaKnown RBP15.51■□□□□ 0.07
PABPC1-205ENST00000518196 NAV1Q8NEY1 1877 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 HLA-DOAP06340 250 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 HSPD1P10809 573 aaKnown RBP15.5■□□□□ 0.07
PABPC1-205ENST00000518196 NF2P35240 595 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 SUPT20HL1Q3ZLR7 823 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 TTC6Q86TZ1 520 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 IFNL3Q8IZI9 196 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 DSCC1Q9BVC3 393 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 NAPBQ9H115 298 aa15.5■□□□□ 0.07
PABPC1-205ENST00000518196 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
PABPC1-205ENST00000518196 SAP30BPQ9UHR5 308 aaKnown RBP15.5■□□□□ 0.07
PABPC1-205ENST00000518196 COL2A1P02458 1487 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-205ENST00000518196 FSTL1Q12841 308 aa15.49■□□□□ 0.07
PABPC1-205ENST00000518196 ALX1Q15699 326 aa15.49■□□□□ 0.07
PABPC1-205ENST00000518196 VPS53Q5VIR6 699 aa15.49■□□□□ 0.07
PABPC1-205ENST00000518196 ZFPM1Q8IX07 1006 aa15.49■□□□□ 0.07
PABPC1-205ENST00000518196 IL25Q9H293 177 aa15.49■□□□□ 0.07
PABPC1-205ENST00000518196 PALD1Q9ULE6 856 aa15.49■□□□□ 0.07
PABPC1-205ENST00000518196 DDTLA6NHG4 134 aaPredicted RBP15.48■□□□□ 0.07
PABPC1-205ENST00000518196 PRAMEF18Q5VWM3 479 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 TMC2Q8TDI7 906 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 CDCA5Q96FF9 252 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 TMEM121BQ9BXQ6 578 aaPredicted RBP15.48■□□□□ 0.07
PABPC1-205ENST00000518196 PI4KBQ9UBF8 816 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 ARPP21Q9UBL0 812 aaPredicted RBP15.48■□□□□ 0.07
PABPC1-205ENST00000518196 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 ATRNL1Q5VV63 1379 aa15.48■□□□□ 0.07
PABPC1-205ENST00000518196 USP17L12C9JPN9 530 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 USP17L21D6R901 530 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 REC8O95072 547 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 ITGBL1O95965 494 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-205ENST00000518196 FGAP02671 866 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 SBK1Q52WX2 424 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-205ENST00000518196 DCAF15Q66K64 600 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 CTR9Q6PD62 1173 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-205ENST00000518196 TEPSINQ96N21 525 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 EPB41L4AQ9HCS5 686 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-205ENST00000518196 ANO2Q9NQ90 1003 aa15.47■□□□□ 0.07
PABPC1-205ENST00000518196 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-205ENST00000518196 ZMYM6O95789 1325 aa15.46■□□□□ 0.07
PABPC1-205ENST00000518196 TRPM7Q96QT4 1865 aa15.46■□□□□ 0.07
PABPC1-205ENST00000518196 MINDY4BA8MYZ0 360 aa15.46■□□□□ 0.07
PABPC1-205ENST00000518196 TRAF5O00463 557 aa15.46■□□□□ 0.07
PABPC1-205ENST00000518196 FOXP2O15409 715 aa15.46■□□□□ 0.07
PABPC1-205ENST00000518196 C12orf60Q5U649 245 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms