RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 GRM5P41594 1212 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 SARSP49591 514 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 RPS26P62854 115 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 TMPRSS15P98073 1019 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 U2AF1Q01081 240 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 CNGB1Q14028 1251 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 PTPN21Q16825 1174 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 SYDE2Q5VT97 1194 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 PEAR1Q5VY43 1037 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 DIEXFQ68CQ4 756 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 VHLLQ6RSH7 139 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 LRRC69Q6ZNQ3 347 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 RINLQ6ZS11 566 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 REC114Q7Z4M0 266 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 SPATS2Q86XZ4 545 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 IFNL2Q8IZJ0 200 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 PPM1KQ8N3J5 372 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 C19orf47Q8N9M1 422 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 NGDNQ8NEJ9 315 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 COG1Q8WTW3 980 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 KLRG1Q96E93 195 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 NLRP3Q96P20 1036 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 GPR101Q96P66 508 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 NECAB3Q96P71 396 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 ZSCAN10Q96SZ4 725 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 ANTXR1Q9H6X2 564 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 ZFYVE1Q9HBF4 777 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 OSGEPQ9NPF4 335 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 PLCB1Q9NQ66 1216 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 INTS7Q9NVH2 962 aaKnown RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 KANSL3Q9P2N6 904 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 RCAN3Q9UKA8 241 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 IPPQ9Y573 584 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 MORC2Q9Y6X9 1032 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 ANO9A1A5B4 782 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 BRINP1O60477 761 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 XYLBO75191 536 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CILPO75339 1184 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 RNASEH2AO75792 299 aaKnown RBP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 GEMIN4P57678 1058 aaKnown RBP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CLN3Q13286 438 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 NCAPHQ15003 741 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 SAFBQ15424 915 aaKnown RBP eCLIP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 SLC10A6Q3KNW5 377 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 ARHGAP29Q52LW3 1261 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CCDC184Q52MB2 194 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 NBPF10Q6P3W6 841 aaKnown RBP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 PKN3Q6P5Z2 889 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 MMS22LQ6ZRQ5 1243 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 SUGP1Q8IWZ8 645 aaKnown RBP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CCDC116Q8IYX3 515 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 ZSCAN1Q8NBB4 408 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CXorf38Q8TB03 319 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 PARD3BQ8TEW8 1205 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 C7orf43Q8WVR3 580 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CLIP3Q96DZ5 547 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 CNNM2Q9H8M5 875 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 EHMT1Q9H9B1 1298 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 SEC31BQ9NQW1 1179 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 ZFATQ9P243 1243 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 SALL4Q9UJQ4 1053 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 PCDHB10Q9UN67 800 aa4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 FRMPD2Q68DX3 1309 aaPredicted RBP4.88□□□□□ -1.63
RNU4-60P-201ENST00000517239 KHNYNO15037 678 aaKnown RBP4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 SUSD5O60279 629 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 FBXO21O94952 628 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 SNUPNO95149 360 aaKnown RBP4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 SRGNP10124 158 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 PYGMP11217 842 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 PHKG2P15735 406 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 GUCY2CP25092 1073 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 PLA2G4AP47712 749 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 TERF1P54274 439 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 STK3Q13188 491 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 BIRC3Q13489 604 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 MAP7Q14244 749 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 GRM3Q14832 879 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 DHCR24Q15392 516 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 CCDC93Q567U6 631 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 IER5Q5VY09 327 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 KIAA1211LQ6NV74 962 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 BICDL1Q6ZP65 573 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 TOGARAM2Q6ZUX3 1019 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 BTLAQ7Z6A9 289 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 NLRP13Q86W25 1043 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 CREBRFQ8IUR6 639 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 PI4K2BQ8TCG2 481 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 USP7Q93009 1102 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 TRMT2BQ96GJ1 504 aaKnown RBP4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 MPP4Q96JB8 637 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 LRGUKQ96M69 825 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 TCF12Q99081 682 aa4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 SUCOQ9UBS9 1254 aaKnown RBP4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 FBXO2Q9UK22 296 aaPredicted RBP4.87□□□□□ -1.63
RNU4-60P-201ENST00000517239 HDAC9Q9UKV0 1011 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms