RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 H3BRJ5 948 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 SMNDC1O75940 238 aaKnown RBP eCLIP0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 SASH3O75995 380 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 VIPR1P32241 457 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 ASPAP45381 313 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 CABP4P57796 275 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 FSTL1Q12841 308 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 SPRED3Q2MJR0 410 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZNF628Q5EBL2 1059 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 IGDCC3Q8IVU1 814 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 LILRA2Q8N149 483 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 PNMA1Q8ND90 353 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 IFT43Q96FT9 208 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 SLC29A3Q9BZD2 475 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 SH2B1Q9NRF2 756 aaPredicted RBP0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 FBLN5Q9UBX5 448 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZNHIT2Q9UHR6 403 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 HRKO00198 91 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 KRT86O43790 486 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 DLGAP3O95886 979 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 PSAPP07602 524 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 EPB42P16452 691 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 TKTP29401 623 aaKnown RBP0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 NOS2P35228 1153 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 ARL4DP49703 201 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 SCNN1DP51172 638 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 DGCR2P98153 550 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 TROAPQ12815 778 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 KRT81Q14533 505 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 PLEKHN1Q494U1 663 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 VWA3BQ502W6 1294 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 ADGRF1Q5T601 910 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZNF627Q7L945 461 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 HDGFL2Q7Z4V5 671 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 ADGRG3Q86Y34 549 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 FOXP4Q8IVH2 680 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZSCAN29Q8IWY8 852 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 SMARCC1Q92922 1105 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 PRRX2Q99811 253 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 PRDM14Q9GZV8 571 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 SUSD2Q9UGT4 822 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 AP4E1Q9UPM8 1137 aa0.42□□□□□ -2.34
SNORA40.16-201ENST00000517238 BUB1BO60566 1050 aaPredicted RBP0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 MT3P25713 68 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 LIMS1P48059 325 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 ATP11AP98196 1134 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 MTFR1Q15390 333 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 NKPD1Q17RQ9 610 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 OLFML2BQ68BL8 750 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 SP5Q6BEB4 398 aaPredicted RBP0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 ADAMTSL4Q6UY14 1074 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 Q6ZTC4 211 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 REXO1Q8N1G1 1221 aaKnown RBP0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 KRI1Q8N9T8 703 aaKnown RBP0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 DUSP23Q9BVJ7 150 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 MMRN2Q9H8L6 949 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 GPR160Q9UJ42 338 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 CEP131Q9UPN4 1083 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 INVSQ9Y283 1065 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 TACC3Q9Y6A5 838 aa0.41□□□□□ -2.34
SNORA40.16-201ENST00000517238 A0A1W2PNU3 283 aaPredicted RBP0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 GNAT3A8MTJ3 354 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 H3BNC9 293 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 PLSCR1O15162 318 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 PTPRAP18433 802 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 MAKP20794 623 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 CTDSPL2Q05D32 466 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 C19orf57Q0VDD7 668 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 TEAD4Q15561 434 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 QPCTQ16769 361 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 USP39Q53GS9 565 aaKnown RBP0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 AKAP4Q5JQC9 854 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 DGKKQ5KSL6 1271 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 CIR1Q86X95 450 aaPredicted RBP0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF843Q8N446 348 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 OXR1Q8N573 874 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 DNERQ8NFT8 737 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF526Q8TF50 670 aaPredicted RBP0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 LRRN4Q8WUT4 740 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZBTB9Q96C00 473 aa0.4□□□□□ -2.35
SNORA40.16-201ENST00000517238 SERTM1A2A2V5 107 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZBTB7BO15156 539 aaPredicted RBP0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 FOXN1O15353 648 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 GALK1P51570 392 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 NCKAP1LP55160 1127 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 PRKD1Q15139 912 aaPredicted RBP0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 SH3PXD2AQ5TCZ1 1133 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 LDHDQ86WU2 507 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 LGI4Q8N135 537 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 CARFQ8N187 725 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 PDZD8Q8NEN9 1154 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 HEXIM2Q96MH2 286 aaKnown RBP0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 HSPA12BQ96MM6 686 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 WWC2-AS2Q96NR7 200 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 TBC1D2Q9BYX2 928 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 ADAMTS10Q9H324 1103 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 SP110Q9HB58 689 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 TXLNGQ9NUQ3 528 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 GTF2IRD1Q9UHL9 959 aa0.39□□□□□ -2.35
SNORA40.16-201ENST00000517238 USP20Q9Y2K6 914 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms