RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 FGD1P98174 961 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PPARAQ07869 468 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 KRT32Q14532 448 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CERKLQ49MI3 558 aaPredicted RBP6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RRP12Q5JTH9 1297 aaKnown RBP6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 C12orf60Q5U649 245 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CTR9Q6PD62 1173 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZNF589Q86UQ0 364 aaPredicted RBP6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZFPM1Q8IX07 1006 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ANKRD13AQ8IZ07 590 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CCDC17Q96LX7 622 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 WRNIP1Q96S55 665 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 KRT23Q9C075 422 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 EHD4Q9H223 541 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CNNM2Q9H8M5 875 aa6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RBM8AQ9Y5S9 174 aaKnown RBP6.46□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CNTNAP1P78357 1384 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ERICH2A1L162 156 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 UNCXA6NJT0 531 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TSPY2A6NKD2 308 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 UBE2Q2LH0YL09 131 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TBC1D12O60347 775 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RANBP6O60518 1105 aaKnown RBP6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CTNND1O60716 968 aaKnown RBP6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ITGBL1O95965 494 aaPredicted RBP6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TSPY3P0CV98 308 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TSPY8P0CW00 308 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CYP2D6P10635 497 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PCP11498 1178 aaKnown RBP6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CDK8P49336 464 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NT5C2P49902 561 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 APLP1P51693 650 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 HUNKP57058 714 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 HAND2P61296 217 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ATP2B2Q01814 1243 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CTDSPL2Q05D32 466 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GRM1Q13255 1194 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SART3Q15020 963 aaKnown RBP6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CCDC178Q5BJE1 867 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 VPS53Q5VIR6 699 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ESR2Q92731 530 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SH2D4AQ9H788 454 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 AS3MTQ9HBK9 375 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GINM1Q9NU53 330 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 COL2A1P02458 1487 aaPredicted RBP6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZMYM6O95789 1325 aa6.45□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MYH7P12883 1935 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ATRNL1Q5VV63 1379 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CYP2D7A0A087X1C5 515 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 EPB41L2O43491 1005 aaKnown RBP6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RAD21O60216 631 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 USP2O75604 605 aaPredicted RBP6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ASNSP08243 561 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PSMA5P28066 241 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ECE1P42892 770 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PLCD1P51178 756 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZNF157P51786 506 aaPredicted RBP6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 C1QTNF8P60827 252 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PTH1RQ03431 593 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RAB3GAP1Q15042 981 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 DEFB115Q30KQ5 88 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 AKNAD1Q5T1N1 836 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 C16orf86Q6ZW13 317 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 IQCA1Q86XH1 822 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NCOA7Q8NI08 942 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MAP4K1Q92918 833 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CCDC102AQ96A19 550 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 DYNLL2Q96FJ2 89 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TEPSINQ96N21 525 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 FEZ1Q99689 392 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 UBAC1Q9BSL1 405 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TBC1D2Q9BYX2 928 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ELP3Q9H9T3 547 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CREBZFQ9NS37 354 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ISY1Q9ULR0 285 aaKnown RBP6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ADAMTSL1Q8N6G6 1762 aa6.44□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZNF646O15015 1829 aaPredicted RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MYO5AQ9Y4I1 1855 aaKnown RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GOLGB1Q14789 3259 aaKnown RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 FAM196BA6NMK8 535 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 USP17L5A8MUK1 530 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PRDM1O75626 825 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GDF11O95390 407 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 HMGB1P09429 215 aaKnown RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 INPP5BP32019 993 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CAP2P40123 477 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TFAP4Q01664 338 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 FMR1Q06787 632 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CREB3L3Q68CJ9 461 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 OTUD7BQ6GQQ9 843 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RGMBQ6NW40 437 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 DLK2Q6UY11 383 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SYNE3Q6ZMZ3 975 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TMEM179Q6ZVK1 233 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SH3BP5LQ7L8J4 393 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ERO1BQ86YB8 467 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SCYL3Q8IZE3 742 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 STAG1Q8WVM7 1258 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms