RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 ATRNL1Q5VV63 1379 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 EYA2O00167 538 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 LDHBP07195 334 aaKnown RBP11.09□□□□□ -0.63
SNHG4-207ENST00000513259 PTPRAP18433 802 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 RFX5P48382 616 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-207ENST00000513259 RGS3P49796 1198 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 IRF5Q13568 498 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 PXYLP1Q8TE99 480 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
SNHG4-207ENST00000513259 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 MYH2Q9UKX2 1941 aa11.09□□□□□ -0.63
SNHG4-207ENST00000513259 TNPO2O14787 897 aaKnown RBP11.08□□□□□ -0.64
SNHG4-207ENST00000513259 ATG9AQ7Z3C6 839 aa11.08□□□□□ -0.64
SNHG4-207ENST00000513259 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
SNHG4-207ENST00000513259 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
SNHG4-207ENST00000513259 DIS3LQ8TF46 1054 aaKnown RBP11.08□□□□□ -0.64
SNHG4-207ENST00000513259 PAK6Q9NQU5 681 aaPredicted RBP11.08□□□□□ -0.64
SNHG4-207ENST00000513259 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.08□□□□□ -0.64
SNHG4-207ENST00000513259 SLC45A1Q9Y2W3 748 aa11.08□□□□□ -0.64
SNHG4-207ENST00000513259 DOCK1Q14185 1865 aa11.07□□□□□ -0.64
SNHG4-207ENST00000513259 DDTLA6NHG4 134 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-207ENST00000513259 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
SNHG4-207ENST00000513259 ENTPD3O75355 529 aa11.07□□□□□ -0.64
SNHG4-207ENST00000513259 MAP3K10Q02779 954 aa11.07□□□□□ -0.64
SNHG4-207ENST00000513259 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-207ENST00000513259 SMCR8Q8TEV9 937 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-207ENST00000513259 IDI2Q9BXS1 227 aa11.07□□□□□ -0.64
SNHG4-207ENST00000513259 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
SNHG4-207ENST00000513259 LRRFIP2Q9Y608 721 aaKnown RBP11.07□□□□□ -0.64
SNHG4-207ENST00000513259 SALL1Q9NSC2 1324 aa11.07□□□□□ -0.64
SNHG4-207ENST00000513259 CAPN2P17655 700 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 PHKA1P46020 1223 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 ATP2B3Q16720 1220 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 NECAB2Q7Z6G3 386 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 C7orf61Q8IZ16 206 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 ANKRD13CQ8N6S4 541 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 COA7Q96BR5 231 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 GDF15Q99988 308 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.06□□□□□ -0.642e-8■■□□□ 12.4
SNHG4-207ENST00000513259 SIL1Q9H173 461 aa11.06□□□□□ -0.64
SNHG4-207ENST00000513259 DDX4Q9NQI0 724 aaKnown RBP11.06□□□□□ -0.64
SNHG4-207ENST00000513259 GNL3LQ9NVN8 582 aaKnown RBP11.06□□□□□ -0.64
SNHG4-207ENST00000513259 ZMYND8Q9ULU4 1186 aaPredicted RBP11.06□□□□□ -0.64
SNHG4-207ENST00000513259 UNC80Q8N2C7 3258 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 STK25O00506 426 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 CTNND1O60716 968 aaKnown RBP11.05□□□□□ -0.64
SNHG4-207ENST00000513259 BMP8BP34820 402 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 TRIM32Q13049 653 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 PICALMQ13492 652 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 CEP126Q9P2H0 1117 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 AGTPBP1Q9UPW5 1226 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 GAKO14976 1311 aa11.05□□□□□ -0.64
SNHG4-207ENST00000513259 RFX7Q2KHR2 1363 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 SEMA3EO15041 775 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 ADORA1P30542 326 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 Q7L0L9 218 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 DEFB123Q8N688 67 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 STK24Q9Y6E0 443 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 PTPRCP08575 1304 aa11.04□□□□□ -0.64
SNHG4-207ENST00000513259 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
SNHG4-207ENST00000513259 PLXNB2O15031 1838 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 FAM196BA6NMK8 535 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 CIAO1O76071 339 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 SYN1P17600 705 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 BTDP43251 543 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 SPP2Q13103 211 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
SNHG4-207ENST00000513259 ANKLE1Q8NAG6 615 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 GJD2Q9UKL4 321 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 DDX60LQ5H9U9 1706 aaKnown RBP11.03□□□□□ -0.64
SNHG4-207ENST00000513259 DNAH12Q6ZR08 3092 aa11.03□□□□□ -0.64
SNHG4-207ENST00000513259 HMGCRP04035 888 aa11.02□□□□□ -0.65
SNHG4-207ENST00000513259 TIMM10P62072 90 aa11.02□□□□□ -0.65
SNHG4-207ENST00000513259 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
SNHG4-207ENST00000513259 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
SNHG4-207ENST00000513259 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
SNHG4-207ENST00000513259 HMX1Q9NP08 348 aaPredicted RBP11.02□□□□□ -0.65
SNHG4-207ENST00000513259 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
SNHG4-207ENST00000513259 PA2G4Q9UQ80 394 aaKnown RBP11.02□□□□□ -0.65
SNHG4-207ENST00000513259 RPTORQ8N122 1335 aa11.02□□□□□ -0.65
SNHG4-207ENST00000513259 ATAD5Q96QE3 1844 aa11.02□□□□□ -0.65
SNHG4-207ENST00000513259 LOC285556D6RIA3 1793 aa11.01□□□□□ -0.65
SNHG4-207ENST00000513259 TBC1D12O60347 775 aa11.01□□□□□ -0.65
SNHG4-207ENST00000513259 MAGEA10P43363 369 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-207ENST00000513259 GCLCP48506 637 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-207ENST00000513259 HMGCS2P54868 508 aa11.01□□□□□ -0.65
SNHG4-207ENST00000513259 RHBDL3P58872 404 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms