RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 PRDM1O75626 825 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
RACK1-230ENST00000513060 PDE4BQ07343 736 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 TRDNQ13061 729 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 COL9A3Q14050 684 aaPredicted RBP16.17■□□□□ 0.18
RACK1-230ENST00000513060 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
RACK1-230ENST00000513060 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
RACK1-230ENST00000513060 TM6SF1Q9BZW5 370 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 FOCADQ5VW36 1801 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 NEDD4P46934 1319 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 PITPNM2Q9BZ72 1349 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 NAV1Q8NEY1 1877 aa16.17■□□□□ 0.18
RACK1-230ENST00000513060 SCN4AP35499 1836 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 FGRP09769 529 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 CPA1P15085 419 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 GABPAQ06546 454 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 RRP12Q5JTH9 1297 aaKnown RBP16.16■□□□□ 0.18
RACK1-230ENST00000513060 C16orf86Q6ZW13 317 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 FOXP4Q8IVH2 680 aaPredicted RBP16.16■□□□□ 0.18
RACK1-230ENST00000513060 CRACR2BQ8N4Y2 399 aaPredicted RBP16.16■□□□□ 0.18
RACK1-230ENST00000513060 SLC44A5Q8NCS7 719 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 NCOA7Q8NI08 942 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 EHD4Q9H223 541 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 NMRK2Q9NPI5 230 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 ROBO3Q96MS0 1386 aa16.16■□□□□ 0.18
RACK1-230ENST00000513060 MYH1P12882 1939 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 COL2A1P02458 1487 aaPredicted RBP16.15■□□□□ 0.18
RACK1-230ENST00000513060 B4E1Z4 1266 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 SLURP2P0DP57 97 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
RACK1-230ENST00000513060 CDK8P49336 464 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 RABEP1Q15276 862 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
RACK1-230ENST00000513060 SULF1Q8IWU6 871 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 TEPSINQ96N21 525 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 KRT23Q9C075 422 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
RACK1-230ENST00000513060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.15■□□□□ 0.18
RACK1-230ENST00000513060 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.18
RACK1-230ENST00000513060 NEK4P51957 841 aa16.14■□□□□ 0.18
RACK1-230ENST00000513060 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.18
RACK1-230ENST00000513060 NKX2-3Q8TAU0 364 aa16.14■□□□□ 0.18
RACK1-230ENST00000513060 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.18
RACK1-230ENST00000513060 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.18
RACK1-230ENST00000513060 CYP46A1Q9Y6A2 500 aa16.14■□□□□ 0.18
RACK1-230ENST00000513060 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
RACK1-230ENST00000513060 ORC4O43929 436 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
RACK1-230ENST00000513060 KDM4AO75164 1064 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 RUFY3Q7L099 469 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 KRT26Q7Z3Y9 468 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 PPP2R3BQ9Y5P8 575 aa16.14■□□□□ 0.17
RACK1-230ENST00000513060 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
RACK1-230ENST00000513060 NBPF12Q5TAG4 269 aaPredicted RBP16.13■□□□□ 0.17
RACK1-230ENST00000513060 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
RACK1-230ENST00000513060 DHX32Q7L7V1 743 aaKnown RBP16.13■□□□□ 0.17
RACK1-230ENST00000513060 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
RACK1-230ENST00000513060 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
RACK1-230ENST00000513060 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
RACK1-230ENST00000513060 ESR2Q92731 530 aa16.13■□□□□ 0.17
RACK1-230ENST00000513060 TCEANC2Q96MN5 208 aa16.13■□□□□ 0.17
RACK1-230ENST00000513060 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
RACK1-230ENST00000513060 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
RACK1-230ENST00000513060 LAMA4Q16363 1823 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 ADM5C9JUS6 153 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 RASA1P20936 1047 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 MCM5P33992 734 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 SHMT1P34896 483 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 DLK2Q6UY11 383 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
RACK1-230ENST00000513060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.17
RACK1-230ENST00000513060 TBC1D12O60347 775 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
RACK1-230ENST00000513060 FAM47AQ5JRC9 791 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 PDRG1Q9NUG6 133 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 TSPY2A6NKD2 308 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 PRC1O43663 620 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 ANTXR2P58335 489 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 TFAP4Q01664 338 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 MAP3K10Q02779 954 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 TATDN1Q6P1N9 297 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 LRRC2Q9BYS8 371 aa16.11■□□□□ 0.17
RACK1-230ENST00000513060 POLR2AP24928 1970 aaKnown RBP16.1■□□□□ 0.17
RACK1-230ENST00000513060 LAMB1P07942 1786 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms