RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SMYD4Q8IYR2 804 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 ACSS3Q9H6R3 686 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 METTL5Q9NRN9 209 aaKnown RBP6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 RNF19AQ9NV58 838 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 CACNA2D2Q9NY47 1150 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 ANGEL1Q9UNK9 670 aaKnown RBP6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 NACADO15069 1562 aa6.85□□□□□ -1.31
HMGB3P13-201ENST00000511263 GBP2P32456 591 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 ADMP35318 185 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 PDE4BQ07343 736 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 MAP3K11Q16584 847 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 CBLL1Q75N03 491 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 GRIN3AQ8TCU5 1115 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 STK35Q8TDR2 534 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 OSBPL1AQ9BXW6 950 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 FAM105AQ9NUU6 356 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 DAGLAQ9Y4D2 1042 aa6.84□□□□□ -1.31
HMGB3P13-201ENST00000511263 NFICP08651 508 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 JAG1P78504 1218 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 LMNB2Q03252 620 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 CYP27C1Q4G0S4 372 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 DUSP27Q5VZP5 1158 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 ZNF507Q8TCN5 953 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 WDR89Q96FK6 387 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 SEMA6CQ9H3T2 930 aa6.83□□□□□ -1.32
HMGB3P13-201ENST00000511263 PRNPP04156 253 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 ZNF76P36508 570 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 TTLL4Q14679 1199 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 SNAP47Q5SQN1 464 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 DISC1Q9NRI5 854 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 GGT7Q9UJ14 662 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 PCDHGC5Q9Y5F6 944 aa6.82□□□□□ -1.32
HMGB3P13-201ENST00000511263 FAM170BA6NMN3 283 aa6.81□□□□□ -1.32
HMGB3P13-201ENST00000511263 RPL6Q02878 288 aaKnown RBP6.81□□□□□ -1.32
HMGB3P13-201ENST00000511263 MLECQ14165 292 aa6.81□□□□□ -1.32
HMGB3P13-201ENST00000511263 PHC3Q8NDX5 983 aa6.81□□□□□ -1.32
HMGB3P13-201ENST00000511263 ROBO2Q9HCK4 1378 aa6.81□□□□□ -1.32
HMGB3P13-201ENST00000511263 DCDC2CA8MYV0 355 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 SCAMP3O14828 347 aaKnown RBP6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 CYP26A1O43174 497 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 HCLS1P14317 486 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 CAMK2GQ13555 558 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 ZAR1Q86SH2 424 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 VSIG10LQ86VR7 867 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 TP53INP2Q8IXH6 220 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 GATA6Q92908 595 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 RNF34Q969K3 372 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 MRRFQ96E11 262 aaKnown RBP6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 PRKAG2Q9UGJ0 569 aa6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 SUPT16HQ9Y5B9 1047 aaKnown RBP6.8□□□□□ -1.32
HMGB3P13-201ENST00000511263 PRAMEF27A3QJZ7 478 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 C8AP07357 584 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 ITGB5P18084 799 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 TFE3P19532 575 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 WIPI1Q5MNZ9 446 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 GATAD2BQ8WXI9 593 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 JARID2Q92833 1246 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 GAL3ST3Q96A11 431 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 BACH2Q9BYV9 841 aa6.79□□□□□ -1.32
HMGB3P13-201ENST00000511263 PF4P02776 101 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 SEPT6Q14141 434 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 PPM1JQ5JR12 505 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 ZBTB37Q5TC79 503 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 ZNF746Q6NUN9 644 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 CYFIP1Q7L576 1253 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 ERMP1Q7Z2K6 904 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 HID1Q8IV36 788 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 PLPPR2Q96GM1 343 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 BSDC1Q9NW68 430 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P13-201ENST00000511263 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 RING1Q06587 406 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 MPP2Q14168 576 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 CWF19L2Q2TBE0 894 aaKnown RBP6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 LRFN4Q6PJG9 635 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 OGFOD3Q6PK18 319 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 ARHGAP27Q6ZUM4 889 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 ISL2Q96A47 359 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 RHOVQ96L33 236 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 PAK6Q9NQU5 681 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 KBTBD4Q9NVX7 518 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 TLR6Q9Y2C9 796 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 PCDHB5Q9Y5E4 795 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 CSADQ9Y600 493 aa6.77□□□□□ -1.33
HMGB3P13-201ENST00000511263 LRIG2O94898 1065 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 RASIP1Q5U651 963 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 MPRIPQ6WCQ1 1025 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 POU5F2Q8N7G0 328 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 MFSD2AQ8NA29 543 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 GOLM1Q8NBJ4 401 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms