RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MCTP2Q6DN12 878 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 IFIH1Q9BYX4 1025 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 HAUS4Q9H6D7 363 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 GEMIN8Q9NWZ8 242 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 ERCC5P28715 1186 aaPredicted RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 GRK7Q8WTQ7 553 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 ZNF189O75820 626 aaPredicted RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 ISM2Q6H9L7 571 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 CCDC144CPQ8IYA2 1237 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 MICAL1Q8TDZ2 1067 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 LCMT1Q9UIC8 334 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 SNRPA1P09661 255 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 HNRNPCL1O60812 293 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 MINDY4BA8MYZ0 360 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 HPDP32754 393 aaPredicted RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 POSTNQ15063 836 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 HAUS3Q68CZ6 603 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 STAG1Q8WVM7 1258 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 LMBRD1Q9NUN5 540 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 PRPF6O94906 941 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 ZNF202O95125 648 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 CEP85Q6P2H3 762 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 DTHD1Q6ZMT9 781 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 CAPN7Q9Y6W3 813 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 TSPY2A6NKD2 308 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 CCDC197Q8NCU1 140 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 ZKSCAN3Q9BRR0 538 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 PFDN4Q9NQP4 134 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 EXOC7Q9UPT5 735 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 GRM8O00222 908 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 RNF8O76064 485 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 N4BP1O75113 896 aaKnown RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 RPS6KB1P23443 525 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 ITIH3Q06033 890 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 HHATQ5VTY9 493 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 GALNT17Q6IS24 598 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 TMX1Q9H3N1 280 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 RIPPLY1Q0D2K3 151 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 C10orf76Q5T2E6 689 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 MYL1P05976 194 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 TTC19Q6DKK2 380 aaPredicted RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 DEXIO95424 95 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 U2AF2P26368 475 aaKnown RBP eCLIP9.28□□□□□ -0.926e-8■■□□□ 12.4
HTT-208ENST00000510626 TMED1Q13445 227 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 LRRC23Q53EV4 343 aaPredicted RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 A0A1B0GVL5 298 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 FAM13AO94988 1023 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 SMTNP53814 917 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 MAP3K2Q9Y2U5 619 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 BCRP11274 1271 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 E7EVH7 732 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 PAG1Q9NWQ8 432 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 ANKIB1Q9P2G1 1089 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 BRD1O95696 1058 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 CCT6BQ92526 530 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 MRPL40Q9NQ50 206 aaKnown RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 NCBP1Q09161 790 aaKnown RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 OSCARQ8IYS5 282 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 C14orf93Q9H972 538 aaKnown RBP9.28□□□□□ -0.92
HTT-208ENST00000510626 RIPOR2Q9Y4F9 1068 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 ASIC2Q16515 512 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 UBE4BO95155 1302 aa9.28□□□□□ -0.92
HTT-208ENST00000510626 CCDC170Q8IYT3 715 aa9.27□□□□□ -0.92
HTT-208ENST00000510626 FAM135BQ49AJ0 1406 aa9.27□□□□□ -0.92
HTT-208ENST00000510626 A0A1W2PQ27 194 aa9.27□□□□□ -0.92
HTT-208ENST00000510626 A0A1W2PQ64 194 aa9.27□□□□□ -0.92
HTT-208ENST00000510626 A0A1W2PQD8 194 aa9.27□□□□□ -0.92
HTT-208ENST00000510626 ST5P78524 1137 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 MCM10Q7L590 875 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 EFHD1Q9BUP0 239 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 JRKLQ9Y4A0 524 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
HTT-208ENST00000510626 FAM210AQ96ND0 272 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 AFMP43652 599 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
HTT-208ENST00000510626 RBM42Q9BTD8 480 aaKnown RBP9.27□□□□□ -0.93
HTT-208ENST00000510626 HSPA1LP34931 641 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 ESRRGP62508 458 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 GUCY1B3Q02153 619 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 NOC4LQ9BVI4 516 aaKnown RBP9.27□□□□□ -0.93
HTT-208ENST00000510626 PLXNC1O60486 1568 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 PLCB3Q01970 1234 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 KARSQ15046 597 aaKnown RBP9.27□□□□□ -0.93
HTT-208ENST00000510626 DHX58Q96C10 678 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 PPP1R9AQ9ULJ8 1098 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 RFC1P35251 1148 aaPredicted RBP9.27□□□□□ -0.93
HTT-208ENST00000510626 CARD6Q9BX69 1037 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 SHANK2Q9UPX8 1470 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 YWHAEP62258 255 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms