RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 PALD1Q9ULE6 856 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 IGF2BP3O00425 579 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLDND1-219ENST00000508659 CTNND1O60716 968 aaKnown RBP20.47■□□□□ 0.87
CLDND1-219ENST00000508659 SLURP2P0DP57 97 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 SLC4A8Q2Y0W8 1093 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 LCORLQ8N3X6 602 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 KBTBD3Q8NAB2 608 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 PI4K2BQ8TCG2 481 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 MS4A4AQ96JQ5 239 aa20.47■□□□□ 0.87
CLDND1-219ENST00000508659 CDK5RAP2Q96SN8 1893 aa20.46■□□□□ 0.87
CLDND1-219ENST00000508659 TESPA1A2RU30 521 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-219ENST00000508659 MBD4O95243 580 aa20.46■□□□□ 0.87
CLDND1-219ENST00000508659 TBC1D8O95759 1140 aa20.46■□□□□ 0.87
CLDND1-219ENST00000508659 CETPP11597 493 aa20.46■□□□□ 0.87
CLDND1-219ENST00000508659 SMC5Q8IY18 1101 aa20.46■□□□□ 0.87
CLDND1-219ENST00000508659 BRI3BPQ8WY22 251 aa20.46■□□□□ 0.87
CLDND1-219ENST00000508659 DOCK1Q14185 1865 aa20.45■□□□□ 0.86
CLDND1-219ENST00000508659 DDX60LQ5H9U9 1706 aaKnown RBP20.45■□□□□ 0.86
CLDND1-219ENST00000508659 CFHR5Q9BXR6 569 aa20.45■□□□□ 0.86
CLDND1-219ENST00000508659 ARMT1Q9H993 441 aa20.45■□□□□ 0.86
CLDND1-219ENST00000508659 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
CLDND1-219ENST00000508659 NAV1Q8NEY1 1877 aa20.44■□□□□ 0.86
CLDND1-219ENST00000508659 PTPRAP18433 802 aa20.44■□□□□ 0.86
CLDND1-219ENST00000508659 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
CLDND1-219ENST00000508659 SLFNL1Q499Z3 407 aa20.44■□□□□ 0.86
CLDND1-219ENST00000508659 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
CLDND1-219ENST00000508659 LNPKQ9C0E8 428 aa20.44■□□□□ 0.86
CLDND1-219ENST00000508659 SIPA1L1O43166 1804 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 IGHDP01880 384 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 CHGBP05060 677 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 TTC6Q86TZ1 520 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 SDR42E1Q8WUS8 393 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 PTPN18Q99952 460 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 FSD1Q9BTV5 496 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 DNAJC18Q9H819 358 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 KCNH4Q9UQ05 1017 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 ZHX2Q9Y6X8 837 aa20.43■□□□□ 0.86
CLDND1-219ENST00000508659 ZFYP08048 801 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-219ENST00000508659 FOXP4Q8IVH2 680 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-219ENST00000508659 EHD4Q9H223 541 aa20.42■□□□□ 0.86
CLDND1-219ENST00000508659 MCM9Q9NXL9 1143 aa20.42■□□□□ 0.86
CLDND1-219ENST00000508659 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-219ENST00000508659 MYH7P12883 1935 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 POLR3DP05423 398 aaPredicted RBP20.41■□□□□ 0.86
CLDND1-219ENST00000508659 CAP2P40123 477 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 CRHR2Q13324 411 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 METTL16Q86W50 562 aaKnown RBP20.41■□□□□ 0.86
CLDND1-219ENST00000508659 CHD1LQ86WJ1 897 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 APPBP2Q92624 585 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 DCP1AQ9NPI6 582 aaPredicted RBP20.41■□□□□ 0.86
CLDND1-219ENST00000508659 SERPINB13Q9UIV8 391 aa20.41■□□□□ 0.86
CLDND1-219ENST00000508659 TRIM75PA6NK02 468 aa20.4■□□□□ 0.86
CLDND1-219ENST00000508659 GPR25O00155 361 aa20.4■□□□□ 0.86
CLDND1-219ENST00000508659 CXCL11O14625 94 aa20.4■□□□□ 0.86
CLDND1-219ENST00000508659 RNF113AO15541 343 aaKnown RBP20.4■□□□□ 0.86
CLDND1-219ENST00000508659 PDE1AP54750 535 aa20.4■□□□□ 0.86
CLDND1-219ENST00000508659 TAF1CQ15572 869 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-219ENST00000508659 NOM1Q5C9Z4 860 aaKnown RBP20.4■□□□□ 0.86
CLDND1-219ENST00000508659 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
CLDND1-219ENST00000508659 ZNF296Q8WUU4 475 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-219ENST00000508659 PUS7LQ9H0K6 701 aaKnown RBP20.4■□□□□ 0.86
CLDND1-219ENST00000508659 ZCCHC17Q9NP64 241 aaKnown RBP20.4■□□□□ 0.86
CLDND1-219ENST00000508659 STAP2Q9UGK3 403 aa20.4■□□□□ 0.86
CLDND1-219ENST00000508659 BTBD19C9JJ37 291 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 NUCB1Q02818 461 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 CCDC84Q86UT8 332 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-219ENST00000508659 AMOTL1Q8IY63 956 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 ATP8A2Q9NTI2 1148 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 AFG3L2Q9Y4W6 797 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 SLC4A4Q9Y6R1 1079 aa20.39■□□□□ 0.85
CLDND1-219ENST00000508659 MYH1P12882 1939 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 A0A0G2JLL6 359 aaPredicted RBP20.38■□□□□ 0.85
CLDND1-219ENST00000508659 PRKAB2O43741 272 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 GDF11O95390 407 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 ASNSP08243 561 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 RRP1BQ14684 758 aaKnown RBP20.38■□□□□ 0.85
CLDND1-219ENST00000508659 PRRT2Q7Z6L0 340 aaPredicted RBP20.38■□□□□ 0.85
CLDND1-219ENST00000508659 R3HDMLQ9H3Y0 253 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 AS3MTQ9HBK9 375 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 ZFYVE28Q9HCC9 887 aa20.38■□□□□ 0.85
CLDND1-219ENST00000508659 FKTNO75072 461 aa20.37■□□□□ 0.85
CLDND1-219ENST00000508659 PLCD1P51178 756 aa20.37■□□□□ 0.85
CLDND1-219ENST00000508659 FASTKD5Q7L8L6 764 aaKnown RBP20.37■□□□□ 0.85
CLDND1-219ENST00000508659 ANKRD23Q86SG2 305 aa20.37■□□□□ 0.85
CLDND1-219ENST00000508659 OSBP2Q969R2 916 aa20.37■□□□□ 0.85
CLDND1-219ENST00000508659 GINM1Q9NU53 330 aa20.37■□□□□ 0.85
CLDND1-219ENST00000508659 ZBTB21Q9ULJ3 1066 aa20.37■□□□□ 0.85
CLDND1-219ENST00000508659 USP17L5A8MUK1 530 aa20.36■□□□□ 0.85
CLDND1-219ENST00000508659 ZNF280CQ8ND82 737 aa20.36■□□□□ 0.85
CLDND1-219ENST00000508659 EVI5LQ96CN4 794 aa20.36■□□□□ 0.85
CLDND1-219ENST00000508659 ATAD5Q96QE3 1844 aa20.36■□□□□ 0.85
CLDND1-219ENST00000508659 PDHXO00330 501 aa20.35■□□□□ 0.85
CLDND1-219ENST00000508659 GPAA1O43292 621 aa20.35■□□□□ 0.85
CLDND1-219ENST00000508659 DGKZQ13574 1117 aa20.35■□□□□ 0.85
CLDND1-219ENST00000508659 TATDN1Q6P1N9 297 aa20.35■□□□□ 0.85
CLDND1-219ENST00000508659 GADL1Q6ZQY3 521 aa20.35■□□□□ 0.85
CLDND1-219ENST00000508659 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms