RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 TOMM22Q9NS69 142 aa15.16■□□□□ 0.02
CDK7-204ENST00000506563 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
CDK7-204ENST00000506563 FZD1Q9UP38 647 aa15.16■□□□□ 0.02
CDK7-204ENST00000506563 PPP2R3BQ9Y5P8 575 aa15.16■□□□□ 0.02
CDK7-204ENST00000506563 ZMYM6O95789 1325 aa15.16■□□□□ 0.02
CDK7-204ENST00000506563 SBK1Q52WX2 424 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 SLC44A5Q8NCS7 719 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
CDK7-204ENST00000506563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDK7-204ENST00000506563 INCENPQ9NQS7 918 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 SIPA1L1O43166 1804 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
CDK7-204ENST00000506563 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
CDK7-204ENST00000506563 ATRNL1Q5VV63 1379 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 SLC27A2O14975 620 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 PRDM1O75626 825 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
CDK7-204ENST00000506563 CYP21A2P08686 494 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 MCCP23508 829 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 TTLL12Q14166 644 aaPredicted RBP15.14■□□□□ 0.01
CDK7-204ENST00000506563 SUPT20HL1Q3ZLR7 823 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 RRP12Q5JTH9 1297 aaKnown RBP15.14■□□□□ 0.01
CDK7-204ENST00000506563 TBC1D10CQ8IV04 446 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 TAF6LQ9Y6J9 622 aa15.14■□□□□ 0.01
CDK7-204ENST00000506563 NF2P35240 595 aa15.13■□□□□ 0.01
CDK7-204ENST00000506563 RNF20Q5VTR2 975 aa15.13■□□□□ 0.01
CDK7-204ENST00000506563 SMC1BQ8NDV3 1235 aa15.13■□□□□ 0.01
CDK7-204ENST00000506563 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
CDK7-204ENST00000506563 MKNK2Q9HBH9 465 aa15.13■□□□□ 0.01
CDK7-204ENST00000506563 SSC5DA1L4H1 1573 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 ZKSCAN1P17029 563 aaPredicted RBP15.12■□□□□ 0.01
CDK7-204ENST00000506563 HSPA4P34932 840 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 CDK8P49336 464 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 PDE4BQ07343 736 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 NECTIN1Q15223 517 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 DCAF15Q66K64 600 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 MFSD6Q6ZSS7 791 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 FOXP4Q8IVH2 680 aaPredicted RBP15.12■□□□□ 0.01
CDK7-204ENST00000506563 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
CDK7-204ENST00000506563 MYH8P13535 1937 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
CDK7-204ENST00000506563 TOMM70O94826 608 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
CDK7-204ENST00000506563 AKNAD1Q5T1N1 836 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 C16orf86Q6ZW13 317 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 MOB2Q70IA6 237 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 C22orf23Q9BZE7 217 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 EHD4Q9H223 541 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 HERC5Q9UII4 1024 aaKnown RBP15.11■□□□□ 0.01
CDK7-204ENST00000506563 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 NEDD4P46934 1319 aa15.11■□□□□ 0.01
CDK7-204ENST00000506563 E7EWF7 191 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 RANBP6O60518 1105 aaKnown RBP15.1■□□□□ 0.01
CDK7-204ENST00000506563 GDF11O95390 407 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 ITGBL1O95965 494 aaPredicted RBP15.1■□□□□ 0.01
CDK7-204ENST00000506563 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 RBM46Q8TBY0 533 aaKnown RBP15.1■□□□□ 0.01
CDK7-204ENST00000506563 STAG1Q8WVM7 1258 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 ZNF341Q9BYN7 854 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 RNF41Q9H4P4 317 aaPredicted RBP15.1■□□□□ 0.01
CDK7-204ENST00000506563 SWAP70Q9UH65 585 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 ANGEL1Q9UNK9 670 aaKnown RBP15.1■□□□□ 0.01
CDK7-204ENST00000506563 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
CDK7-204ENST00000506563 B4E1Z4 1266 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 PPP1R12BO60237 982 aaPredicted RBP15.09■□□□□ 0.01
CDK7-204ENST00000506563 SHMT1P34896 483 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 GABPAQ06546 454 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 TRDNQ13061 729 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 FAM47AQ5JRC9 791 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 RALYLQ86SE5 291 aaKnown RBP15.09■□□□□ 0.01
CDK7-204ENST00000506563 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
CDK7-204ENST00000506563 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
CDK7-204ENST00000506563 EPB41L2O43491 1005 aaKnown RBP15.08■□□□□ 0
CDK7-204ENST00000506563 TBC1D12O60347 775 aa15.08■□□□□ 0
CDK7-204ENST00000506563 USP2O75604 605 aaPredicted RBP15.08■□□□□ 0
CDK7-204ENST00000506563 RASA1P20936 1047 aa15.08■□□□□ 0
CDK7-204ENST00000506563 INPP5BP32019 993 aa15.08■□□□□ 0
CDK7-204ENST00000506563 IREB2P48200 963 aaKnown RBP15.08■□□□□ 0
CDK7-204ENST00000506563 SHROOM1Q2M3G4 852 aaPredicted RBP15.08■□□□□ 0
CDK7-204ENST00000506563 ADCK5Q3MIX3 580 aa15.08■□□□□ 0
CDK7-204ENST00000506563 CERKLQ49MI3 558 aaPredicted RBP15.08■□□□□ 0
CDK7-204ENST00000506563 JAKMIP1Q96N16 626 aaKnown RBP15.08■□□□□ 0
CDK7-204ENST00000506563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.08■□□□□ 0
CDK7-204ENST00000506563 TSPY2A6NKD2 308 aa15.07■□□□□ 0
CDK7-204ENST00000506563 UBE2Q2LH0YL09 131 aa15.07■□□□□ 0
CDK7-204ENST00000506563 KDM4AO75164 1064 aa15.07■□□□□ 0
CDK7-204ENST00000506563 TSPY3P0CV98 308 aa15.07■□□□□ 0
CDK7-204ENST00000506563 TSPY8P0CW00 308 aa15.07■□□□□ 0
CDK7-204ENST00000506563 CPA1P15085 419 aa15.07■□□□□ 0
CDK7-204ENST00000506563 AKR1B1P15121 316 aa15.07■□□□□ 0
CDK7-204ENST00000506563 TFAP4Q01664 338 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms