RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CERS3Q8IU89 383 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 IFNL3Q8IZI9 196 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 TGFBRAP1Q8WUH2 860 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 MAP4K1Q92918 833 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 GLIS2Q9BZE0 524 aaPredicted RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 RTN4Q9NQC3 1192 aaKnown RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 ATP8A2Q9NTI2 1148 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 CYP2D7A0A087X1C5 515 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 TCP10L2B9ZVM9 353 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 PATL2C9JE40 543 aaKnown RBP5.94□□□□□ -1.46
LMNB1-208ENST00000504788 HIP1O00291 1037 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 CDC45O75419 566 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 BAG3O95817 575 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 MAP3K11Q16584 847 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 APOBEC3FQ8IUX4 373 aaKnown RBP5.94□□□□□ -1.46
LMNB1-208ENST00000504788 MAPKAPK5Q8IW41 473 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 TEX11Q8IYF3 940 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 RBM46Q8TBY0 533 aaKnown RBP5.94□□□□□ -1.46
LMNB1-208ENST00000504788 KCNB2Q92953 911 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 IL17RAQ96F46 866 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 DSCC1Q9BVC3 393 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 ZNF112Q9UJU3 913 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 ANAPC4Q9UJX5 808 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 PALD1Q9ULE6 856 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 FZD1Q9UP38 647 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 PPP2R3BQ9Y5P8 575 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 THSD7BQ9C0I4 1608 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 PARP14Q460N5 1801 aa5.94□□□□□ -1.46
LMNB1-208ENST00000504788 USP17L12C9JPN9 530 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 USP17L21D6R901 530 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 TBC1D12O60347 775 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 CYP21A2P08686 494 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 CYP2D6P10635 497 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 PLCG2P16885 1265 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 RBM5P52756 815 aaKnown RBP eCLIP5.93□□□□□ -1.46
LMNB1-208ENST00000504788 TCP10Q12799 353 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 SHROOM1Q2M3G4 852 aaPredicted RBP5.93□□□□□ -1.46
LMNB1-208ENST00000504788 EAPPQ56P03 285 aaPredicted RBP5.93□□□□□ -1.46
LMNB1-208ENST00000504788 TATDN1Q6P1N9 297 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 CDC37L1Q7L3B6 337 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 KRT26Q7Z3Y9 468 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 AIDAQ96BJ3 306 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.93□□□□□ -1.46
LMNB1-208ENST00000504788 EHD4Q9H223 541 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
LMNB1-208ENST00000504788 RLFQ13129 1914 aa5.93□□□□□ -1.46
LMNB1-208ENST00000504788 EPB41L2O43491 1005 aaKnown RBP5.92□□□□□ -1.46
LMNB1-208ENST00000504788 USP2O75604 605 aaPredicted RBP5.92□□□□□ -1.46
LMNB1-208ENST00000504788 GNAT2P19087 354 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 SHMT1P34896 483 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 NOVP48745 357 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 PICALMQ13492 652 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 LRRFIP1Q32MZ4 808 aaKnown RBP5.92□□□□□ -1.46
LMNB1-208ENST00000504788 LDLRAD1Q5T700 205 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 STOX1Q6ZVD7 989 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 USP48Q86UV5 1035 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 KLRG1Q96E93 195 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 CDCA5Q96FF9 252 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 USP26Q9BXU7 913 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 CRNKL1Q9BZJ0 848 aaKnown RBP5.92□□□□□ -1.46
LMNB1-208ENST00000504788 DHX36Q9H2U1 1008 aaKnown RBP5.92□□□□□ -1.46
LMNB1-208ENST00000504788 VEZTQ9HBM0 779 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 DIAPH3Q9NSV4 1193 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 SLC4A4Q9Y6R1 1079 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 MYH4Q9Y623 1939 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 FAM196BA6NMK8 535 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 MYO1BO43795 1136 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 GUCY1A2P33402 732 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 TNFAIP1Q13829 316 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 TSGA10IPQ3SY00 556 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.92□□□□□ -1.46
LMNB1-208ENST00000504788 C16orf86Q6ZW13 317 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 SIAH1Q8IUQ4 282 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 TBC1D10CQ8IV04 446 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 RASEFQ8IZ41 740 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 SLC44A5Q8NCS7 719 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.92□□□□□ -1.462e-18■■■□□ 14.9
LMNB1-208ENST00000504788 DYNLL2Q96FJ2 89 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 CSRNP1Q96S65 589 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 KIF2CQ99661 725 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 INCENPQ9NQS7 918 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 LOC285556D6RIA3 1793 aa5.92□□□□□ -1.46
LMNB1-208ENST00000504788 PLIN4Q96Q06 1357 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 HSPA4P34932 840 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 PPARAQ07869 468 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 FSTL1Q12841 308 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-208ENST00000504788 ASTLQ6HA08 431 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-208ENST00000504788 MOB2Q70IA6 237 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 SULF1Q8IWU6 871 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 SMC1BQ8NDV3 1235 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 DCPSQ96C86 337 aaKnown RBP5.91□□□□□ -1.46
LMNB1-208ENST00000504788 BACH2Q9BYV9 841 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 MCM9Q9NXL9 1143 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 PI4KBQ9UBF8 816 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 ARPP21Q9UBL0 812 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-208ENST00000504788 SAP30BPQ9UHR5 308 aaKnown RBP5.91□□□□□ -1.46
LMNB1-208ENST00000504788 HTTP42858 3142 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 CENPFP49454 3210 aa5.91□□□□□ -1.46
LMNB1-208ENST00000504788 IGKV6D-41A0A0C4DH26 115 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms