RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ADORA1P30542 326 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 METAP2P50579 478 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEDD9-208ENST00000504387 SLC39A14Q15043 492 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 BRD3Q15059 726 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 TSGA10IPQ3SY00 556 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 TTC39AQ5SRH9 613 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 NUP133Q8WUM0 1156 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 C19orf44Q9H6X5 657 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 ADAMTS13Q76LX8 1427 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 PLEKHG2Q9H7P9 1386 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 IKBKBO14920 756 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 ATP2C2O75185 946 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 GUCY1A2P33402 732 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 GGCXP38435 758 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 IMMTQ16891 758 aaKnown RBP8.66□□□□□ -1.02
NEDD9-208ENST00000504387 AFAP1L1Q8TED9 768 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 MED15Q96RN5 788 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 HAUS7Q99871 368 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 PUS7LQ9H0K6 701 aaKnown RBP8.66□□□□□ -1.02
NEDD9-208ENST00000504387 HPS5Q9UPZ3 1129 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 USP31Q70CQ4 1352 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 FRMD3A2A2Y4 597 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 ZNF213O14771 459 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 SLC7A5Q01650 507 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 POSTNQ15063 836 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 KAT2BQ92831 832 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 CHP1Q99653 195 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 TAB2Q9NYJ8 693 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 SMARCAL1Q9NZC9 954 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 FAM205CA6NFA0 338 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 N4BP3O15049 544 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 IDH1O75874 414 aaKnown RBP8.65□□□□□ -1.02
NEDD9-208ENST00000504387 GUCY2CP25092 1073 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 PPARAQ07869 468 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 SCARF1Q14162 830 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 MAP9Q49MG5 647 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 BCAS4Q8TDM0 211 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 PPM1EQ8WY54 764 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 CRACR2AQ9BSW2 395 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 KCND1Q9NSA2 647 aa8.65□□□□□ -1.02
NEDD9-208ENST00000504387 KDRP35968 1356 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 ATP8B1O43520 1251 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 ERLIN2O94905 339 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 MYBL2P10244 700 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 ZNF274Q96GC6 653 aaPredicted RBP8.65□□□□□ -1.03
NEDD9-208ENST00000504387 EPSTI1Q96J88 318 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 PLIN2Q99541 437 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 JPH2Q9BR39 696 aaPredicted RBP8.65□□□□□ -1.03
NEDD9-208ENST00000504387 KAT14Q9H8E8 782 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 PCDHB6Q9Y5E3 794 aa8.65□□□□□ -1.03
NEDD9-208ENST00000504387 MACROD2A1Z1Q3 448 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 CXCR5P32302 372 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 ANTXR2P58335 489 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 RNASE9P60153 205 aaKnown RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 KIRREL3Q8IZU9 778 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 CEP112Q8N8E3 955 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 HELBQ8NG08 1087 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 MMS19Q96T76 1030 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 MYCBPQ99417 103 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 NAPGQ99747 312 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 BPIFA3Q9BQP9 254 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 ALDH8A1Q9H2A2 487 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 TUBGCP6Q96RT7 1819 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 SALL1Q9NSC2 1324 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 MYO1FO00160 1098 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 RNF113AO15541 343 aaKnown RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 CD44P16070 742 aaKnown RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 IARSP41252 1262 aaKnown RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 CORO7P57737 925 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 RNF187Q5TA31 235 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-208ENST00000504387 TADA2BQ86TJ2 420 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 JMYQ8N9B5 988 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 CABP5Q9NP86 173 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 JADE2Q9NQC1 790 aa8.64□□□□□ -1.03
NEDD9-208ENST00000504387 PEAK1Q9H792 1746 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 EXOC5O00471 708 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 SNRPA1P09661 255 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 C2orf54Q08AI8 447 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 STIM1Q13586 685 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 EZH2Q15910 746 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CCDC57Q2TAC2 916 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CYB5R4Q7L1T6 521 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 SH2D3CQ8N5H7 860 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CCDC148Q8NFR7 591 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 FAM89AQ96GI7 184 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 METTL22Q9BUU2 404 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 GNL3LQ9NVN8 582 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 TUBE1Q9UJT0 475 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 MYO6Q9UM54 1294 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CTNND2Q9UQB3 1225 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CAPN7Q9Y6W3 813 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 DUSP10Q9Y6W6 482 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 NRKQ7Z2Y5 1582 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 GOLGA6L9A6NEM1 432 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 GOLGA8AA7E2F4 631 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms