RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ATG14Q6ZNE5 492 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 KCT2Q8NC54 265 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 RELTQ969Z4 430 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 CITED4Q96RK1 184 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 FOXQ1Q9C009 403 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 EPB41L4BQ9H329 900 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 NSUN3Q9H649 340 aaKnown RBP4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 SSU72Q9NP77 194 aaKnown RBP4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 SEMA3GQ9NS98 782 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 TMEM39AQ9NV64 488 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 CCDC87Q9NVE4 849 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 FANCGO15287 622 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 PPP1R15AO75807 674 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 EOMESO95936 686 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 RING1Q06587 406 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 FAAP100Q0VG06 881 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 MTMR3Q13615 1198 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 THAP5Q7Z6K1 395 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 C20orf173Q96LM9 149 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 CSRNP1Q96S65 589 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 EMILIN2Q9BXX0 1053 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 PARD6AQ9NPB6 346 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 DCP1AQ9NPI6 582 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 EGFL7Q9UHF1 273 aa4.56□□□□□ -1.68
HMGB1P35-201ENST00000503360 LINC00310P59036 64 aa4.55□□□□□ -1.68
HMGB1P35-201ENST00000503360 ALPK1Q96QP1 1244 aa4.55□□□□□ -1.68
HMGB1P35-201ENST00000503360 CARS2Q9HA77 564 aaKnown RBP4.55□□□□□ -1.68
HMGB1P35-201ENST00000503360 PRDM5Q9NQX1 630 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P35-201ENST00000503360 SMG5Q9UPR3 1016 aaKnown RBP4.55□□□□□ -1.68
HMGB1P35-201ENST00000503360 ETV2O00321 342 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 RAC2P15153 192 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 ARNTP27540 789 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 NTF4P34130 210 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 ZNF252P-AS1Q0IIN9 211 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 USPL1Q5W0Q7 1092 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 COX4I2Q96KJ9 171 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 NPHS2Q9NP85 383 aa4.54□□□□□ -1.68
HMGB1P35-201ENST00000503360 NUAK1O60285 661 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 CAP2P40123 477 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 ABHD4Q8TB40 342 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 CCDC74AQ96AQ1 378 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 BORCS6Q96GS4 357 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 DIRC2Q96SL1 478 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 FAM129BQ96TA1 746 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 ZC3H12CQ9C0D7 883 aaKnown RBP4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 PPP4R2Q9NY27 417 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 BRPF3Q9ULD4 1205 aa4.53□□□□□ -1.68
HMGB1P35-201ENST00000503360 TMEM88BA6NKF7 163 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 LRIG2O94898 1065 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 PDIA4P13667 645 aaKnown RBP4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 NME2P22392 152 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 SULF2Q8IWU5 870 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 MFSD4AQ8N468 514 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 RETREG2Q8NC44 543 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 KCNN1Q92952 543 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 KCNB2Q92953 911 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 ATP13A1Q9HD20 1204 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 ST14Q9Y5Y6 855 aa4.52□□□□□ -1.69
HMGB1P35-201ENST00000503360 ADAMTS20P59510 1910 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 FOXD2O60548 495 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 PEX10O60683 326 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 ICMTO60725 284 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 SEMA7AO75326 666 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 TRIM37O94972 964 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 HPXP02790 462 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 ZBTB37Q5TC79 503 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 ZNF746Q6NUN9 644 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 TMPRSS7Q7RTY8 843 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 IRF2BP1Q8IU81 584 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 BAHD1Q8TBE0 780 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 HSPA12BQ96MM6 686 aa4.51□□□□□ -1.69
HMGB1P35-201ENST00000503360 FAM155AB1AL88 458 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 NDUFB5O43674 189 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 GADD45BO75293 160 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 SYN1P17600 705 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 GRM2Q14416 872 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 SFRP5Q5T4F7 317 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 PHLDB3Q6NSJ2 640 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 DTHD1Q6ZMT9 781 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 TMEM151BQ8IW70 566 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 CXorf38Q8TB03 319 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 GPBAR1Q8TDU6 330 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 KCNC2Q96PR1 638 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 RTEL1Q9NZ71 1219 aa4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 GPN3Q9UHW5 284 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P35-201ENST00000503360 EIF1AYO14602 144 aaKnown RBP4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 IGHA2P01877 340 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 KIR3DL1P43629 444 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 ZNF157P51786 506 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 ORC1Q13415 861 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 PPM1JQ5JR12 505 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 CDC37L1Q7L3B6 337 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 ARMCX6Q7L4S7 300 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 MFSD2AQ8NA29 543 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 ZNF507Q8TCN5 953 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 ANKRD24Q8TF21 1146 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 MYLIPQ8WY64 445 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 ALKBH8Q96BT7 664 aaKnown RBP4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 TMEM59LQ9UK28 342 aa4.49□□□□□ -1.69
HMGB1P35-201ENST00000503360 CAPN6Q9Y6Q1 641 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms