RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 LRRC47Q8N1G4 583 aaKnown RBP10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 C2orf69Q8N8R5 385 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 SSBP05455 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 KIAA2012Q0VF49 1180 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 CPXCR1Q8N123 301 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 DYNLL2Q96FJ2 89 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 TBC1D2Q9BYX2 928 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 CFAP45Q9UL16 551 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 SUGT1Q9Y2Z0 365 aa10.94□□□□□ -0.66
GAPVD1-219ENST00000495955 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 SPATA32Q96LK8 384 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 ZHX3Q9H4I2 956 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 ZBED4O75132 1171 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 SKOR2Q2VWA4 1001 aaPredicted RBP10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 HSPA4P34932 840 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 CCDC174Q6PII3 467 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 TDRD7Q8NHU6 1098 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 SLC10A4Q96EP9 437 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 CCDC17Q96LX7 622 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 C6orf50Q9HD87 102 aa10.93□□□□□ -0.66
GAPVD1-219ENST00000495955 PRPF40AO75400 957 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 HOXA10P31260 410 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 NOC3LQ8WTT2 800 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 FAM13BQ9NYF5 915 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 BIN2Q9UBW5 565 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 SAMD7Q7Z3H4 446 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 STRBPQ96SI9 672 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 IVNS1ABPQ9Y6Y0 642 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 MED23Q9ULK4 1368 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 SPDYE3A6NKU9 549 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 SYT17Q9BSW7 474 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 HOMER2Q9NSB8 354 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 BAG4O95429 457 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 RPS12P25398 132 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 NSUN4Q96CB9 384 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-219ENST00000495955 FRMPD2Q68DX3 1309 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 KINO60870 393 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 TRMT1LQ7Z2T5 733 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 TXNRD3Q86VQ6 643 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 FOXP4Q8IVH2 680 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 DAGLAQ9Y4D2 1042 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 TNKSO95271 1327 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 TRIM75PA6NK02 468 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 NRDCO43847 1150 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 NLGN2Q8NFZ4 835 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 PABPC4Q13310 644 aaKnown RBP eCLIP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 TMEM266Q2M3C6 531 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 USH1GQ495M9 461 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 ANGEL2Q5VTE6 544 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 TMED8Q6PL24 325 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 LSG1Q9H089 658 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 ZNF609O15014 1411 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 FAM196BA6NMK8 535 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 BECN2A8MW95 431 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 CYP2D6P10635 497 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 WRNIP1Q96S55 665 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 GGA3Q9NZ52 723 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 SAMM50Q9Y512 469 aa10.91□□□□□ -0.66
GAPVD1-219ENST00000495955 B4DLN1 442 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 OTUD7BQ6GQQ9 843 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 AMIGO3Q86WK7 504 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 AGBL3Q8NEM8 1001 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 MAP4K1Q92918 833 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 NCOA5Q9HCD5 579 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 SCAF8Q9UPN6 1271 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 PTPDC1A2A3K4 754 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 PCP11498 1178 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 CDK8P49336 464 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 RBM25P49756 843 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 LRP10Q7Z4F1 713 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 CHURC1Q8WUH1 139 aa10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
GAPVD1-219ENST00000495955 STX6O43752 255 aa10.9□□□□□ -0.67
GAPVD1-219ENST00000495955 FLOT1O75955 427 aa10.9□□□□□ -0.67
GAPVD1-219ENST00000495955 PNMA1Q8ND90 353 aa10.9□□□□□ -0.67
GAPVD1-219ENST00000495955 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.67
GAPVD1-219ENST00000495955 XIRP1Q702N8 1843 aaKnown RBP10.9□□□□□ -0.67
GAPVD1-219ENST00000495955 DDNO94850 711 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 TPM2P07951 284 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 TOP1P11387 765 aaKnown RBP10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 CXCL9Q07325 125 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 KCPQ6ZWJ8 1503 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 NWD2Q9ULI1 1742 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 COL22A1Q8NFW1 1626 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 GOLGA6L19H0YKK7 550 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 GOLGA8HP0CJ92 632 aa10.89□□□□□ -0.67
GAPVD1-219ENST00000495955 GNA11P29992 359 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms