RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
CSTF1-206ENST00000493039 SCN4AP35499 1836 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 TDO2P48775 406 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 STOX1Q6ZVD7 989 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
CSTF1-206ENST00000493039 KIF2CQ99661 725 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 NACAP1Q9BZK3 213 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 KCNG1Q9UIX4 513 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 ATRNL1Q5VV63 1379 aa11.15□□□□□ -0.62
CSTF1-206ENST00000493039 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
CSTF1-206ENST00000493039 GABPAQ06546 454 aa11.15□□□□□ -0.62
CSTF1-206ENST00000493039 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
CSTF1-206ENST00000493039 PNMA8AQ86V59 439 aaPredicted RBP11.15□□□□□ -0.62
CSTF1-206ENST00000493039 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.62
CSTF1-206ENST00000493039 DYNLL2Q96FJ2 89 aa11.15□□□□□ -0.62
CSTF1-206ENST00000493039 ANAPC4Q9UJX5 808 aa11.15□□□□□ -0.62
CSTF1-206ENST00000493039 MINDY4BA8MYZ0 360 aa11.15□□□□□ -0.63
CSTF1-206ENST00000493039 PPARAQ07869 468 aa11.15□□□□□ -0.63
CSTF1-206ENST00000493039 DNAJC18Q9H819 358 aa11.15□□□□□ -0.63
CSTF1-206ENST00000493039 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.63
CSTF1-206ENST00000493039 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.63
CSTF1-206ENST00000493039 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 DDX60LQ5H9U9 1706 aaKnown RBP11.14□□□□□ -0.63
CSTF1-206ENST00000493039 BAZ2AQ9UIF9 1905 aaKnown RBP11.14□□□□□ -0.63
CSTF1-206ENST00000493039 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 FGRP09769 529 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 RBM25P49756 843 aaKnown RBP11.14□□□□□ -0.63
CSTF1-206ENST00000493039 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 METTL16Q86W50 562 aaKnown RBP11.14□□□□□ -0.63
CSTF1-206ENST00000493039 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 TBC1D32Q96NH3 1257 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 ARPP21Q9UBL0 812 aaPredicted RBP11.14□□□□□ -0.63
CSTF1-206ENST00000493039 CTNNA3Q9UI47 895 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 FOCADQ5VW36 1801 aa11.14□□□□□ -0.63
CSTF1-206ENST00000493039 ADM5C9JUS6 153 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 ZNF213O14771 459 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 NBPF12Q5TAG4 269 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 KIF3CO14782 793 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 POLR3DP05423 398 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 TNFAIP1Q13829 316 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 MAP1SQ66K74 1059 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 APOBEC3FQ8IUX4 373 aaKnown RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
CSTF1-206ENST00000493039 GLIS2Q9BZE0 524 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 POLR2AP24928 1970 aaKnown RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-206ENST00000493039 E7EWF7 191 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 RRP1BQ14684 758 aaKnown RBP11.12□□□□□ -0.63
CSTF1-206ENST00000493039 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-206ENST00000493039 DCPSQ96C86 337 aaKnown RBP11.12□□□□□ -0.63
CSTF1-206ENST00000493039 DDRGK1Q96HY6 314 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSTF1-206ENST00000493039 ROBO3Q96MS0 1386 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 PRDM1O75626 825 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 SHMT1P34896 483 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 C16orf86Q6ZW13 317 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 MIGA2Q7L4E1 593 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 PLCD4Q9BRC7 762 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 EHD4Q9H223 541 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-206ENST00000493039 SERPINB13Q9UIV8 391 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 NEDD4P46934 1319 aa11.12□□□□□ -0.63
CSTF1-206ENST00000493039 SSC5DA1L4H1 1573 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 TNNI2P48788 182 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 CDK8P49336 464 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 JAG1P78504 1218 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
CSTF1-206ENST00000493039 AKNAD1Q5T1N1 836 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 STAG1Q8WVM7 1258 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 TRAF5O00463 557 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
CSTF1-206ENST00000493039 CPA1P15085 419 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 YY1P25490 414 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 CDC37L1Q7L3B6 337 aa11.11□□□□□ -0.63
CSTF1-206ENST00000493039 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
CSTF1-206ENST00000493039 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
CSTF1-206ENST00000493039 MYH1P12882 1939 aa11.1□□□□□ -0.63
CSTF1-206ENST00000493039 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
CSTF1-206ENST00000493039 PHF20L1A8MW92 1017 aa11.1□□□□□ -0.63
CSTF1-206ENST00000493039 ANAPC15P60006 121 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms