RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 SNED1Q8TER0 1413 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 BRCA1P38398 1863 aaKnown RBP10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 STK36Q9NRP7 1315 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 SMIM22K7EJ46 135 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 RANBP6O60518 1105 aaKnown RBP10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 USP17L8P0C7I0 530 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 RXRAP19793 462 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 SEC23AQ15436 765 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 RTN1Q16799 776 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 TEX11Q8IYF3 940 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 RGS22Q8NE09 1264 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 C8orf76Q96K31 380 aa10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
SMARCC1-208ENST00000492896 PRDM1O75626 825 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 FDPSP14324 419 aaKnown RBP10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 CDC27P30260 824 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 UBE2HP62256 183 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 L1TD1Q5T7N2 865 aaKnown RBP10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 C12orf60Q5U649 245 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 CCDC144CPQ8IYA2 1237 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 SUPT20HQ8NEM7 779 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 TGFBRAP1Q8WUH2 860 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 ZSCAN10Q96SZ4 725 aaPredicted RBP10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 MYL10Q9BUA6 226 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 DAGLAQ9Y4D2 1042 aa10.67□□□□□ -0.7
SMARCC1-208ENST00000492896 ELP1O95163 1332 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 FLT1P17948 1338 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 CCDC196A0A1B0GTZ2 297 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 GOLGA6L3A6NEY3 463 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 GADD45BO75293 160 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 POLR3DP05423 398 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 IARSP41252 1262 aaKnown RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 RHBDL3P58872 404 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 FKBP1AP62942 108 aaKnown RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 GUCY1B3Q02153 619 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 IFIT1BQ5T764 474 aaKnown RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 CATIPQ7Z7H3 387 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 CERS5Q8N5B7 392 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 ENAHQ8N8S7 591 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 PDGFDQ9GZP0 370 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 DBNDD1Q9H9R9 158 aa10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 ZNF219Q9P2Y4 722 aaPredicted RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
SMARCC1-208ENST00000492896 FSD2A1L4K1 749 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 TSPY2A6NKD2 308 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 ECE2O60344 883 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 PPFIA3O75145 1194 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 DDAH1O94760 285 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 CALM1P0DP23 149 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 CALM2P0DP24 149 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 CALM3P0DP25 149 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 IFNAR1P17181 557 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 ZNF445P59923 1031 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 EVX2Q03828 476 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 SSRP1Q08945 709 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 PPP2R5BQ15173 497 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 NTRK3Q16288 839 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 SLC4A8Q2Y0W8 1093 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 ZSCAN23Q3MJ62 389 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 FAM173BQ6P4H8 233 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 TTC6Q86TZ1 520 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 NUP133Q8WUM0 1156 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 C7orf43Q8WVR3 580 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 WASF1Q92558 559 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 ZNF396Q96N95 335 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 SLC26A6Q9BXS9 759 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 ZNF287Q9HBT7 754 aa10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 RBM27Q9P2N5 1060 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 SAP30BPQ9UHR5 308 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-208ENST00000492896 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 TRIM29Q14134 588 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 CCDC178Q5BJE1 867 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 FAM47AQ5JRC9 791 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 STRIP1Q5VSL9 837 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 TTLL6Q8N841 843 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 FBXO18Q8NFZ0 1043 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 LEO1Q8WVC0 666 aaPredicted RBP10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 PHKBQ93100 1093 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 TEKT1Q969V4 418 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms