RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 ZBTB37Q5TC79 503 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 UBE3DQ7Z6J8 389 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 KCT2Q8NC54 265 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 ANKRD24Q8TF21 1146 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 HEXIM2Q96MH2 286 aaKnown RBP6.16□□□□□ -1.42
VPS36-205ENST00000492650 FRMD6Q96NE9 622 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 TRAIPQ9BWF2 469 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
VPS36-205ENST00000492650 PRAMEF27A3QJZ7 478 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 EIF4BP23588 611 aaKnown RBP6.15□□□□□ -1.42
VPS36-205ENST00000492650 NTF4P34130 210 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 INPP5AQ14642 412 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 SCARA3Q6AZY7 606 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 SV2BQ7L1I2 683 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 HDXQ7Z353 690 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 ZNF507Q8TCN5 953 aa6.15□□□□□ -1.42
VPS36-205ENST00000492650 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
VPS36-205ENST00000492650 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 GNAT3A8MTJ3 354 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 LMNB1P20700 586 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 PTPN11Q06124 597 aaPredicted RBP6.14□□□□□ -1.43
VPS36-205ENST00000492650 ANGEL2Q5VTE6 544 aaKnown RBP6.14□□□□□ -1.43
VPS36-205ENST00000492650 TTBK2Q6IQ55 1244 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 OGFOD2Q6N063 350 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 LRFN4Q6PJG9 635 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 SNX11Q9Y5W9 270 aa6.14□□□□□ -1.43
VPS36-205ENST00000492650 IGF2BP3O00425 579 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS36-205ENST00000492650 PAPLNO95428 1278 aa6.13□□□□□ -1.43
VPS36-205ENST00000492650 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
VPS36-205ENST00000492650 GNA15P30679 374 aa6.13□□□□□ -1.43
VPS36-205ENST00000492650 CCDC85BQ15834 202 aaPredicted RBP6.13□□□□□ -1.43
VPS36-205ENST00000492650 ARMCX6Q7L4S7 300 aa6.13□□□□□ -1.43
VPS36-205ENST00000492650 FAM214BQ7L5A3 538 aa6.13□□□□□ -1.43
VPS36-205ENST00000492650 PLPPR2Q96GM1 343 aa6.13□□□□□ -1.43
VPS36-205ENST00000492650 MBNL3Q9NUK0 354 aaKnown RBP6.13□□□□□ -1.43
VPS36-205ENST00000492650 ADAMTS6Q9UKP5 1117 aa6.13□□□□□ -1.43
VPS36-205ENST00000492650 PRPF40AO75400 957 aaKnown RBP6.12□□□□□ -1.43
VPS36-205ENST00000492650 LRIG2O94898 1065 aa6.12□□□□□ -1.43
VPS36-205ENST00000492650 ETF1P62495 437 aaKnown RBP6.12□□□□□ -1.43
VPS36-205ENST00000492650 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.12□□□□□ -1.43
VPS36-205ENST00000492650 ATG4DQ86TL0 474 aaPredicted RBP6.12□□□□□ -1.43
VPS36-205ENST00000492650 ASB11Q8WXH4 323 aa6.12□□□□□ -1.43
VPS36-205ENST00000492650 TNKS2Q9H2K2 1166 aa6.12□□□□□ -1.43
VPS36-205ENST00000492650 PRDM5Q9NQX1 630 aaPredicted RBP6.12□□□□□ -1.43
VPS36-205ENST00000492650 EOMESO95936 686 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 FGD1P98174 961 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 IKZF1Q13422 519 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 WIPI1Q5MNZ9 446 aaPredicted RBP6.11□□□□□ -1.43
VPS36-205ENST00000492650 CYFIP1Q7L576 1253 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 AEBP1Q8IUX7 1158 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 LRRN4CLQ8ND94 238 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 DUSP9Q99956 384 aaKnown RBP6.11□□□□□ -1.43
VPS36-205ENST00000492650 FOXQ1Q9C009 403 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 WNT10AQ9GZT5 417 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 FBRSQ9HAH7 460 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 TPX2Q9ULW0 747 aaKnown RBP6.11□□□□□ -1.43
VPS36-205ENST00000492650 SNCAIPQ9Y6H5 919 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 AK5Q9Y6K8 562 aa6.11□□□□□ -1.43
VPS36-205ENST00000492650 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 SLITRK5O94991 958 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 CDK8P49336 464 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 MAP3K11Q16584 847 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 NKPD1Q17RQ9 610 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 EAPPQ56P03 285 aaPredicted RBP6.1□□□□□ -1.43
VPS36-205ENST00000492650 SLC23A3Q6PIS1 610 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 SPACA3Q8IXA5 215 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 GAL3ST3Q96A11 431 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 MIPEPQ99797 713 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 PRDM7Q9NQW5 492 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 RNF19AQ9NV58 838 aa6.1□□□□□ -1.43
VPS36-205ENST00000492650 FAM155AB1AL88 458 aaPredicted RBP6.09□□□□□ -1.43
VPS36-205ENST00000492650 ZP2Q05996 745 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 SEPT6Q14141 434 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 SLBPQ14493 270 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS36-205ENST00000492650 NKG7Q16617 165 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 POU5F2Q8N7G0 328 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 FAM168AQ92567 244 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 MAPK8IP1Q9UQF2 711 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 PCDHB5Q9Y5E4 795 aa6.09□□□□□ -1.43
VPS36-205ENST00000492650 GRK4P32298 578 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 CLCN7P51798 805 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 RPS26P62854 115 aaKnown RBP6.08□□□□□ -1.44
VPS36-205ENST00000492650 SFRP5Q5T4F7 317 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 CDKAL1Q5VV42 579 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 HID1Q8IV36 788 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 MFSD2AQ8NA29 543 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 XAGE3Q8WTP9 111 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 CARMIL2Q6F5E8 1435 aa6.08□□□□□ -1.44
VPS36-205ENST00000492650 CNTNAP4Q9C0A0 1308 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 PRR33A8MZF0 331 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 C8AP07357 584 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 LETMD1Q6P1Q0 360 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 SND1Q7KZF4 910 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS36-205ENST00000492650 RIN3Q8TB24 985 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 MIR1-1HGQ9H1L0 117 aa6.07□□□□□ -1.44
VPS36-205ENST00000492650 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
VPS36-205ENST00000492650 PITPNM2Q9BZ72 1349 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 CBX7O95931 251 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms