RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
PUM1-210ENST00000490546 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
PUM1-210ENST00000490546 NCOA7Q8NI08 942 aa12.25□□□□□ -0.45
PUM1-210ENST00000490546 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
PUM1-210ENST00000490546 TMEM39BQ9GZU3 492 aa12.25□□□□□ -0.45
PUM1-210ENST00000490546 SERPINB13Q9UIV8 391 aa12.25□□□□□ -0.45
PUM1-210ENST00000490546 ASTN2O75129 1339 aaPredicted RBP12.25□□□□□ -0.45
PUM1-210ENST00000490546 DDTLA6NHG4 134 aaPredicted RBP12.24□□□□□ -0.45
PUM1-210ENST00000490546 COL2A1P02458 1487 aaPredicted RBP12.24□□□□□ -0.45
PUM1-210ENST00000490546 NT5C2P49902 561 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 PLCD1P51178 756 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 BLOC1S2Q6QNY1 142 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 STAG1Q8WVM7 1258 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 TM6SF1Q9BZW5 370 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 EHD4Q9H223 541 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
PUM1-210ENST00000490546 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
PUM1-210ENST00000490546 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
PUM1-210ENST00000490546 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 RANBP6O60518 1105 aaKnown RBP12.23□□□□□ -0.45
PUM1-210ENST00000490546 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
PUM1-210ENST00000490546 NF2P35240 595 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 CDK8P49336 464 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 FGD1P98174 961 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 RABEP1Q15276 862 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 DCAF15Q66K64 600 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 C16orf86Q6ZW13 317 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 USP48Q86UV5 1035 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 ESR2Q92731 530 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.23□□□□□ -0.45
PUM1-210ENST00000490546 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 PGAP2Q9UHJ9 254 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 SCAF8Q9UPN6 1271 aaKnown RBP12.23□□□□□ -0.45
PUM1-210ENST00000490546 MYH8P13535 1937 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 LAMB1P07942 1786 aa12.23□□□□□ -0.45
PUM1-210ENST00000490546 ORC4O43929 436 aa12.22□□□□□ -0.45
PUM1-210ENST00000490546 MCM5P33992 734 aa12.22□□□□□ -0.45
PUM1-210ENST00000490546 SART3Q15020 963 aaKnown RBP12.22□□□□□ -0.45
PUM1-210ENST00000490546 SH3BP5LQ7L8J4 393 aa12.22□□□□□ -0.45
PUM1-210ENST00000490546 TBC1D10CQ8IV04 446 aa12.22□□□□□ -0.45
PUM1-210ENST00000490546 ROBO3Q96MS0 1386 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 ERICH2A1L162 156 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 TSPY2A6NKD2 308 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 B4E1Z4 1266 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 ST18O60284 1047 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 TBC1D12O60347 775 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 PRDM1O75626 825 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 NEK4P51957 841 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 ADCK5Q3MIX3 580 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.45
PUM1-210ENST00000490546 CCDC178Q5BJE1 867 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
PUM1-210ENST00000490546 IQCA1Q86XH1 822 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 CCDC17Q96LX7 622 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 NBPF3Q9H094 633 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 CABP5Q9NP86 173 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 INCENPQ9NQS7 918 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 TAF6LQ9Y6J9 622 aa12.21□□□□□ -0.45
PUM1-210ENST00000490546 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
PUM1-210ENST00000490546 KDM4AO75164 1064 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 FGRP09769 529 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 TSPY3P0CV98 308 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 TSPY8P0CW00 308 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 YY1P25490 414 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 TFAP4Q01664 338 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 GABPAQ06546 454 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 NBPF12Q5TAG4 269 aaPredicted RBP12.2□□□□□ -0.46
PUM1-210ENST00000490546 STOX1Q6ZVD7 989 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
PUM1-210ENST00000490546 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 TEPSINQ96N21 525 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
PUM1-210ENST00000490546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.2□□□□□ -0.461e-12■□□□□ 9.3
PUM1-210ENST00000490546 NEDD4P46934 1319 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 PRC1O43663 620 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 PPP1R12BO60237 982 aaPredicted RBP12.19□□□□□ -0.46
PUM1-210ENST00000490546 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 EVX2Q03828 476 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 TTLL12Q14166 644 aaPredicted RBP12.19□□□□□ -0.46
PUM1-210ENST00000490546 ANKRD1Q15327 319 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 MAP1SQ66K74 1059 aaPredicted RBP12.19□□□□□ -0.46
PUM1-210ENST00000490546 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
PUM1-210ENST00000490546 SLC44A5Q8NCS7 719 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms