RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.32
VTI1A-206ENST00000489142 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
VTI1A-206ENST00000489142 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
VTI1A-206ENST00000489142 PLCG2P16885 1265 aa17.08■□□□□ 0.32
VTI1A-206ENST00000489142 PPP4CP60510 307 aa17.08■□□□□ 0.32
VTI1A-206ENST00000489142 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
VTI1A-206ENST00000489142 ARHGAP39Q9C0H5 1083 aa17.08■□□□□ 0.32
VTI1A-206ENST00000489142 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
VTI1A-206ENST00000489142 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 EFCC1Q9HA90 598 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 CPA4Q9UI42 421 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 AFG3L2Q9Y4W6 797 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
VTI1A-206ENST00000489142 GOLIM4O00461 696 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 TBC1D12O60347 775 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 TLR2O60603 784 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 CYP2C8P10632 490 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 SHROOM1Q2M3G4 852 aaPredicted RBP17.06■□□□□ 0.32
VTI1A-206ENST00000489142 GPAT2Q6NUI2 795 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 CENPFP49454 3210 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 MYH7P12883 1935 aa17.06■□□□□ 0.32
VTI1A-206ENST00000489142 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
VTI1A-206ENST00000489142 CXCL11O14625 94 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 USP5P45974 858 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 RGS19P49795 217 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
VTI1A-206ENST00000489142 BOLA2Q9H3K6 86 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
VTI1A-206ENST00000489142 PI4KBQ9UBF8 816 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 PTPN22Q9Y2R2 807 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
VTI1A-206ENST00000489142 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
VTI1A-206ENST00000489142 ADGRA2Q96PE1 1338 aa17.04■□□□□ 0.32
VTI1A-206ENST00000489142 PDE6AP16499 860 aa17.04■□□□□ 0.32
VTI1A-206ENST00000489142 CAP2P40123 477 aa17.04■□□□□ 0.32
VTI1A-206ENST00000489142 MLLT1Q03111 559 aaPredicted RBP17.04■□□□□ 0.32
VTI1A-206ENST00000489142 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
VTI1A-206ENST00000489142 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
VTI1A-206ENST00000489142 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
VTI1A-206ENST00000489142 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
VTI1A-206ENST00000489142 MGAMO43451 1857 aa17.03■□□□□ 0.32
VTI1A-206ENST00000489142 GDF11O95390 407 aa17.03■□□□□ 0.32
VTI1A-206ENST00000489142 CTGFP29279 349 aa17.03■□□□□ 0.32
VTI1A-206ENST00000489142 RRP1P56182 461 aaKnown RBP17.03■□□□□ 0.32
VTI1A-206ENST00000489142 JAG1P78504 1218 aa17.03■□□□□ 0.32
VTI1A-206ENST00000489142 LACTBP83111 547 aaPredicted RBP17.03■□□□□ 0.32
VTI1A-206ENST00000489142 TTF1Q15361 905 aaPredicted RBP17.03■□□□□ 0.32
VTI1A-206ENST00000489142 SLC9C2Q5TAH2 1124 aa17.03■□□□□ 0.32
VTI1A-206ENST00000489142 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
VTI1A-206ENST00000489142 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
VTI1A-206ENST00000489142 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 CHGBP05060 677 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 SPP2Q13103 211 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 TREML2Q5T2D2 321 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.02■□□□□ 0.32
VTI1A-206ENST00000489142 RIOK1Q9BRS2 568 aaKnown RBP17.02■□□□□ 0.32
VTI1A-206ENST00000489142 PAG1Q9NWQ8 432 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 PTCH2Q9Y6C5 1203 aa17.02■□□□□ 0.32
VTI1A-206ENST00000489142 MAGEB6P1A0A0J9YX57 407 aa17.01■□□□□ 0.31
VTI1A-206ENST00000489142 KIF22Q14807 665 aa17.01■□□□□ 0.31
VTI1A-206ENST00000489142 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
VTI1A-206ENST00000489142 FASTKD5Q7L8L6 764 aaKnown RBP17.01■□□□□ 0.31
VTI1A-206ENST00000489142 PARK7Q99497 189 aaKnown RBP17.01■□□□□ 0.31
VTI1A-206ENST00000489142 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
VTI1A-206ENST00000489142 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 IGSF3O75054 1194 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 HLA-DOAP06340 250 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 ATP5JP18859 108 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 HMGCS2P54868 508 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 EVX2Q03828 476 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 ZNF280CQ8ND82 737 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
VTI1A-206ENST00000489142 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
VTI1A-206ENST00000489142 PSMC4P43686 418 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 METTL16Q86W50 562 aaKnown RBP16.99■□□□□ 0.31
VTI1A-206ENST00000489142 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
VTI1A-206ENST00000489142 LCORLQ8N3X6 602 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 TRIM47Q96LD4 638 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 HAUS7Q99871 368 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
VTI1A-206ENST00000489142 BCRP11274 1271 aa16.98■□□□□ 0.31
VTI1A-206ENST00000489142 MTMR2Q13614 643 aa16.98■□□□□ 0.31
VTI1A-206ENST00000489142 SDR42E1Q8WUS8 393 aa16.98■□□□□ 0.31
VTI1A-206ENST00000489142 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
VTI1A-206ENST00000489142 ARMT1Q9H993 441 aa16.98■□□□□ 0.31
VTI1A-206ENST00000489142 MYH8P13535 1937 aa16.98■□□□□ 0.31
VTI1A-206ENST00000489142 RBBP6Q7Z6E9 1792 aaKnown RBP16.97■□□□□ 0.31
VTI1A-206ENST00000489142 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
VTI1A-206ENST00000489142 FMNL1O95466 1100 aaPredicted RBP16.97■□□□□ 0.31
VTI1A-206ENST00000489142 PLCD1P51178 756 aa16.97■□□□□ 0.31
VTI1A-206ENST00000489142 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
VTI1A-206ENST00000489142 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms