RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 DIEXFQ68CQ4 756 aaKnown RBP5.34□□□□□ -1.55
RBM28-207ENST00000488249 CDC37L1Q7L3B6 337 aa5.34□□□□□ -1.55
RBM28-207ENST00000488249 GATAD2BQ8WXI9 593 aa5.34□□□□□ -1.55
RBM28-207ENST00000488249 WNT10AQ9GZT5 417 aa5.34□□□□□ -1.55
RBM28-207ENST00000488249 ATG3Q9NT62 314 aa5.34□□□□□ -1.55
RBM28-207ENST00000488249 RNF112Q9ULX5 631 aa5.34□□□□□ -1.55
RBM28-207ENST00000488249 FAM221AA4D161 298 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 PRR19A6NJB7 356 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 SCAMP3O14828 347 aaKnown RBP5.33□□□□□ -1.56
RBM28-207ENST00000488249 CILPO75339 1184 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 F13A1P00488 732 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 EIF4A3P38919 411 aaKnown RBP5.33□□□□□ -1.56
RBM28-207ENST00000488249 CDK5R2Q13319 367 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 SNAP47Q5SQN1 464 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 GOLM1Q8NBJ4 401 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 KCT2Q8NC54 265 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 ZNF507Q8TCN5 953 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 PSMG3-AS1Q96PY0 264 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 OSBPL1AQ9BXW6 950 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 TACC3Q9Y6A5 838 aa5.33□□□□□ -1.56
RBM28-207ENST00000488249 FAM170BA6NMN3 283 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 BPNT1O95861 308 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 TGFB1P01137 390 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 GRK4P32298 578 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 ETF1P62495 437 aaKnown RBP5.32□□□□□ -1.56
RBM28-207ENST00000488249 CYP27A1Q02318 531 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 CPSF6Q16630 551 aaKnown RBP eCLIP5.32□□□□□ -1.568e-9■■■□□ 14.9
RBM28-207ENST00000488249 FBXL19Q6PCT2 694 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 OGFOD3Q6PK18 319 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 UBE3DQ7Z6J8 389 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 RNF34Q969K3 372 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 METTL22Q9BUU2 404 aaPredicted RBP5.32□□□□□ -1.56
RBM28-207ENST00000488249 KCNQ5Q9NR82 932 aa5.32□□□□□ -1.56
RBM28-207ENST00000488249 GREM1O60565 184 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 DUSP27Q5VZP5 1158 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 FAM196AQ6ZSG2 479 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 ZNF765Q7L2R6 523 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 USP48Q86UV5 1035 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 ZNF296Q8WUU4 475 aaPredicted RBP5.31□□□□□ -1.56
RBM28-207ENST00000488249 ZNF428Q96B54 188 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 FBRSQ9HAH7 460 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 PIM2Q9P1W9 311 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 ADAMTS1Q9UHI8 967 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 LEMD3Q9Y2U8 911 aa5.31□□□□□ -1.56
RBM28-207ENST00000488249 SUPT16HQ9Y5B9 1047 aaKnown RBP5.31□□□□□ -1.56
RBM28-207ENST00000488249 ROBO2Q9HCK4 1378 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 COBLO75128 1261 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 FAM87AP0C7U9 286 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 CAP2P40123 477 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 PDE4BQ07343 736 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 MPP2Q14168 576 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 SLBPQ14493 270 aaKnown RBP eCLIP5.3□□□□□ -1.56
RBM28-207ENST00000488249 NKG7Q16617 165 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 XP32Q5T750 250 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 HID1Q8IV36 788 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 FBXO27Q8NI29 283 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 DUSP23Q9BVJ7 150 aa5.3□□□□□ -1.56
RBM28-207ENST00000488249 TLR3O15455 904 aaKnown RBP5.29□□□□□ -1.56
RBM28-207ENST00000488249 LEFTY1O75610 366 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 LRIG2O94898 1065 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 PGRP06401 933 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 FOSL1P15407 271 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 GRIK1P39086 918 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 ZNF394Q53GI3 561 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 INTS5Q6P9B9 1019 aaKnown RBP5.29□□□□□ -1.56
RBM28-207ENST00000488249 ARMCX6Q7L4S7 300 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 REC114Q7Z4M0 266 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 METTL16Q86W50 562 aaKnown RBP5.29□□□□□ -1.56
RBM28-207ENST00000488249 TOP6BLQ8N6T0 577 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 LRRC3Q9BY71 257 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 FOXQ1Q9C009 403 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 PRDM10Q9NQV6 1147 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 ADAM30Q9UKF2 790 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 PCDHGB7Q9Y5F8 929 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 CORINQ9Y5Q5 1042 aa5.29□□□□□ -1.56
RBM28-207ENST00000488249 CYP26A1O43174 497 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 MED26O95402 600 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 PLCG1P19174 1290 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 HOXA10P31260 410 aaPredicted RBP5.28□□□□□ -1.56
RBM28-207ENST00000488249 SSTR4P31391 388 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 CD97P48960 835 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 HDLBPQ00341 1268 aaKnown RBP5.28□□□□□ -1.56
RBM28-207ENST00000488249 LRP8Q14114 963 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 CWF19L2Q2TBE0 894 aaKnown RBP5.28□□□□□ -1.56
RBM28-207ENST00000488249 KIAA0825Q8IV33 1275 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 MRPL41Q8IXM3 137 aaKnown RBP5.28□□□□□ -1.56
RBM28-207ENST00000488249 TMEM87BQ96K49 555 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 SPON2Q9BUD6 331 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 NT5C1AQ9BXI3 368 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 TJP2Q9UDY2 1190 aa5.28□□□□□ -1.56
RBM28-207ENST00000488249 DDX41Q9UJV9 622 aaKnown RBP5.28□□□□□ -1.56
RBM28-207ENST00000488249 POLR3KQ9Y2Y1 108 aaPredicted RBP5.28□□□□□ -1.56
RBM28-207ENST00000488249 PRR36Q9H6K5 1346 aa5.27□□□□□ -1.57
RBM28-207ENST00000488249 SCO2A0A1W2PP80 73 aa5.27□□□□□ -1.57
RBM28-207ENST00000488249 GRIN3BO60391 1043 aa5.27□□□□□ -1.57
RBM28-207ENST00000488249 CST3P01034 146 aaPredicted RBP5.27□□□□□ -1.57
RBM28-207ENST00000488249 CRKP46108 304 aa5.27□□□□□ -1.57
RBM28-207ENST00000488249 RBM25P49756 843 aaKnown RBP5.27□□□□□ -1.57
RBM28-207ENST00000488249 RACK1P63244 317 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 386.4 ms